KEGG   Agrobacterium fabrum: Atu1324Help
Entry
Atu1324           CDS       T00070                                 

Gene name
gatB
Definition
(RefSeq) glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
atu  Agrobacterium fabrum
Pathway
atu00970  Aminoacyl-tRNA biosynthesis
atu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:atu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Atu1324 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:atu03029]
    Atu1324 (gatB)
Enzymes [BR:atu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     Atu1324 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     Atu1324 (gatB)
Mitochondrial biogenesis [BR:atu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    Atu1324 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-GeneID: 1133362
NCBI-ProteinID: NP_354330
UniProt: Q8UFS3
LinkDB All DBs
Position
circular:1312454..1313959
Genome map
AA seq 501 aa AA seqDB search
MTLVDVRTPDPKRFIPGATGDWEIVIGLEVHAQVLSNSKLFSGASTTFGNAPNSNVSLVD
AAMPGMLPVINEECVKQAVRTGLGLKAKINNRSIFDRKNYFYPDLPQGYQISQFKDPIVG
EGTITISLGPDRQGNFEDIEIGIERLHLEQDAGKSMHDQHPTMSFVDLNRSGVALMEIVS
KPDMRSSDEAKGYLTKLRSIVRYLGTCDGNMDEGSMRADVNVSVRRPGEGFGTRCEIKNV
NSIRFVGQAIEYEARRQVAILEDGGVIDQETRLFDPGKGETRSMRSKEDAHDYRYFPDPD
LLPLEFDDAFVEALKVDLPELPDDKKARFVADLGLSVYDASILVSEKAIADYYEAVAAGR
DAKTAANWVINDLLGALNKFGKDIETTPVSPDQLGGIIDLIKAETISGKIAKDLFEIVWN
EGGNPAEIVEARGMKQVTDTGAIEKAVDDIIAANPDQVEKVKAKPTLAGWFVGQVMKATG
GKANPQAVQALVKAKLGIEDE
NT seq 1506 nt NT seq  +upstreamnt  +downstreamnt
atgacccttgtagacgtgcgcacccccgacccgaaacgcttcattcccggcgccaccggc
gattgggaaatcgtgatcggcctcgaagtccatgcgcaggttctctccaattccaagctg
ttttccggcgcgtccaccactttcggcaatgcgccgaattccaacgtctcgctggtggac
gccgccatgcccggcatgctgcccgttatcaacgaggaatgcgtcaaacaggccgtgcgc
acgggcctcggcctgaaggcgaagatcaacaaccgttcgatcttcgaccgcaagaactac
ttttatccggatttgccgcagggctaccagatttcgcagttcaaggacccgatcgtcggt
gagggcaccatcaccatttcgctcggtccggaccgccagggcaacttcgaggatatcgag
attggcatcgagcgcctgcatctggagcaggacgccggcaagtcgatgcacgaccagcat
ccgaccatgtccttcgtggacctgaaccgttcgggcgtggcgctgatggaaatcgtctcc
aagccggacatgcgctcgtcggatgaggccaagggttacctcaccaagctgcgctccatc
gtccgttacctcggcacctgcgacggcaatatggacgaaggctcgatgcgcgccgacgtc
aacgtctccgtgcgccgcccgggcgaaggttttggcacgcgctgcgaaatcaagaacgtc
aactccatccgcttcgtcggccaggccatcgaatacgaggcgcgccgtcaggtcgccatt
ctcgaagatggcggtgtcatcgatcaggaaacccgcctgttcgatcccggcaagggcgag
acgcggtccatgcgctccaaggaagacgcgcatgactatcgctatttcccggatcccgat
ctgctgccgctggaattcgatgatgcttttgtagaagctctgaaggtcgatctgccagag
cttcccgatgacaagaaggcccgtttcgtggccgatctcggcttgtcggtctatgacgcc
tcgattctcgtgtcggaaaaggcgattgccgattattatgaagccgttgccgccggtcgc
gatgcgaagaccgctgccaactgggtgatcaacgatcttctcggtgcgctgaacaagttc
ggcaaggatatcgagacgactccggtttcgcccgaccagctgggcggcatcatcgatctc
atcaaggctgagaccatttccggcaagatcgccaaggacctgttcgaaatcgtctggaac
gagggcggcaacccggccgaaatcgtcgaagcccgcggcatgaagcaggtgaccgacacc
ggcgccatcgaaaaggctgttgatgatatcatcgccgccaacccggatcaggtcgagaag
gtcaaggcgaagccgacgcttgccggctggttcgtcggtcaggtgatgaaggcgacgggc
ggtaaggccaacccgcaggcagtgcaggcactggtcaaggccaagctcggcatcgaggac
gagtaa

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