Agrobacterium fabrum: Atu1485
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Entry
Atu1485 CDS
T00070
Symbol
prtI
Name
(GenBank) ECF family sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
atu
Agrobacterium fabrum
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atu03021
]
Atu1485 (prtI)
Transcription machinery [BR:
atu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Atu1485 (prtI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
AAK87276
UniProt:
Q7CZ55
LinkDB
All DBs
Position
circular:complement(1475968..1476474)
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AA seq
168 aa
AA seq
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MPDFLDEMTSCIPALRRYANALTHDRDTADDLVQDCLERAIRKKALWRPQGPLRPWLYRV
LVNVYRNNLRGSKRRPQQIPIDDVTEQLVVPAAQTGRVALAEMARAIEKLSGEHRETLLL
VVVEGLTYAEAANILEIPLGTLMSRLGRARTALARMTQEDQPNLKVIK
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgccggactttctggacgagatgacaagttgcataccagcgctccgacgttatgcgaat
gcactgacgcatgatcgcgacacggctgacgatctcgtccaggactgtctggaaagagcg
atccgcaaaaaggcgttgtggcgaccgcaggggccgttgcgcccttggctgtatcgggtg
cttgtcaatgtctaccgcaacaatctgcgcggcagtaaacgccggccccagcaaatcccg
atcgacgatgttacggaacaactggtcgtgccggcggcgcagacgggtcgggttgcgctg
gcggaaatggcccgcgccatcgaaaaactgtccggcgaacaccgcgagaccctgctcctc
gtcgttgtcgaaggcctgacctatgcggaagccgcgaatattcttgaaattccccttggc
acactgatgtcccgtctgggacgagcccgaacggcgcttgcccgcatgacccaggaagac
cagccaaatctcaaggtgataaaatga
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