Agrobacterium fabrum: Atu3601
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Entry
Atu3601 CDS
T00070
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00300
Lysine biosynthesis
atu00470
D-Amino acid metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu01120
Microbial metabolism in diverse environments
atu01230
Biosynthesis of amino acids
Module
atu_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Atu3601 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Atu3601 (lysA)
Enzymes [BR:
atu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Atu3601 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AAK89796
UniProt:
A9CFF5
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All DBs
Position
linear:654822..656090
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AA seq
422 aa
AA seq
DB search
MNHFGYIDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYKVFSGAFADVDAMVCYAMK
ANSNQAVLKTLAKLGAGIDVVSGGELRRALAAGVPASRIMFSGVGKTVAEMDYALEAGIY
CFNIESEPELEVLNLRAVKAGKRAHVSFRINPDVDARTHAKISTGKKENKFGISYERARA
VYAHAATLPGIEVTGIDMHIGSQITELQPFEDAFRLLRELVEVLRTDGHAISHVDIGGGL
GIPYRDDNNPPPLPDAYAHIVKNELKSLNCKIVTEPGRLIVGNAGILVTEVIYVKDGGDK
TFVIVDGAMNDLIRPTLYEAYHGIRPVVQPSENAPRIKADIVGPVCETGDYLALDREMAA
PQPGDLIAVSSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRGTYEELIALDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccattttggctatatcgacggcgtgctgcacgccgaaaacgtgcccgtgcccgag
atcgccaaggcggtcggcacgcccttctacgtctattccacagcaacgctggagcgccac
tacaaggtgttctcaggcgctttcgcggatgtggacgccatggtctgttacgccatgaag
gccaattccaaccaggcggtgctgaagacgctggcgaaactcggtgccggcatcgacgtg
gtctccggcggcgaattgcgccgtgcactggctgccggcgtgcccgcaagccgcatcatg
ttctccggtgtcggcaagaccgtggcggaaatggattacgcgctggaagccggcatctat
tgcttcaacatcgaatccgaaccggaactggaagtcctcaacctgcgcgccgtcaaggcc
ggcaagcgggcgcatgtctccttccgcatcaatccggatgtggatgcgcgcacccacgcc
aagatttccaccggaaaaaaagaaaacaagttcggcatttcctatgagcgggcgcgtgcg
gtctatgcccatgccgccaccctgcccggcatcgaagtcaccggcatcgacatgcatatc
ggcagccagatcaccgaattgcagcctttcgaagatgccttccggctgctgcgcgaactg
gtggaagtgctgcgtaccgatggccatgcgatcagccacgtcgatattggcggcggcctc
ggcattccctaccgcgacgacaacaatccgccgccgctgccggatgcctatgctcatatc
gtcaagaacgagctgaagagcctcaactgcaagatcgtcaccgagcccggccgcctgatt
gtcggcaatgccggcattctggtgacggaagtgatctatgtgaaagatggcggcgacaaa
accttcgtgatcgtcgatggcgccatgaacgaccttattcgcccgacgctctacgaagcc
tatcacggcatccgcccggtggtgcagccttcagagaacgcgccgcgcatcaaggccgat
atcgttggtccggtctgcgaaaccggcgattatctggcgctcgaccgcgagatggcggca
ccgcagccgggtgatctcatcgccgtcagttcagccggcgcctatggcgcggtgcaggcc
ggcacctataattcgcgtctgctggtgccggaagtgctcgtcaagggcgacaggttccac
gtcatccgcccgcgcggtacctatgaggaactgatcgccctcgattccgtgcccgcctgg
ctcgattga
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