Agrobacterium fabrum: Atu4310
Help
Entry
Atu4310 CDS
T00070
Symbol
soxB
Name
(GenBank) sarcosine oxidase beta subunit
KO
K00303
sarcosine oxidase, subunit beta [EC:
1.5.3.24
1.5.3.1
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00260
Glycine, serine and threonine metabolism
atu01100
Metabolic pathways
Module
atu_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Atu4310 (soxB)
Enzymes [BR:
atu01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
Atu4310 (soxB)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
Atu4310 (soxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Thi4
NAD_binding_8
FAD_binding_2
Pyr_redox_3
Trp_halogenase
FAD_oxidored
Pyr_redox_2
FAD_binding_3
Pyr_redox
Rhodanese
ThiF
NAD_binding_9
PglD_N
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
AAK89129
UniProt:
A9CGE7
LinkDB
All DBs
Position
linear:1436024..1437277
Genome browser
AA seq
417 aa
AA seq
DB search
MTRFNAFNLLRNALTGNKNWDEQWPDSQPKAEYDVVIVGAGGHGLGAAYYLASQHGITNV
AVIDKGWLGGGNTGRNTTIIRSNYLYDESARLYDHAVDLWENLSQELNYNVMYSRRGVLM
LAHNVHDVQSFKRHIHSNRLNGVDNRWLSAEECKEYCPPLSLAPNARYPVMGGALQERAG
TARHDAVAWGYARGAAARGVDIIQNCPVTAIRRNADGSVAGVETARGFIKAKKVAVSAAG
HTSVVMDTAGVRLPLESYPLQALVSEPIKPIFPCVVMSNAVHAYISQSDKGELVIGSGTD
QYTSYSQRGGLPLIEHTIAAIVEIFPIFNRMRMLRKWGGIVDVTPDRSAILGKTPVEGLY
VNCGWGTGGFKATPGAAHTFAWTIAKNEPHPINAPFTLERFRSGRLIDEAAAAAVAH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttttaatgccttcaatcttttgcggaatgccctgaccggcaacaagaactgg
gacgagcagtggcctgacagccagccgaaagccgaatatgacgtggtcatcgtcggcgcc
ggcggccatggtctgggcgcggcctattatctggccagccagcacggcatcaccaacgtg
gccgtcatcgacaagggctggctcggcggcggcaataccggccgcaacacgacgatcatc
cgctccaactatctctatgatgagagcgcccgtctttatgaccatgccgtcgatctgtgg
gaaaatctcagccaggaactcaattacaacgtcatgtattcccggcgcggcgtgctgatg
ctggcgcataacgttcacgacgtgcagagcttcaagcgccatatccattccaaccgcctg
aacggcgtcgataatcgctggctcagcgcggaggaatgcaaggaatattgcccgcccttg
agccttgcgccgaatgcccgttaccctgtcatgggcggcgcattgcaggaacgggcgggc
acggcgcgccacgatgcggtcgcctggggttatgcgcgcggtgccgccgcccgtggtgtc
gatatcattcagaactgcccggtcaccgccattcgtcgtaatgccgatggctccgttgcc
ggtgtggaaacggcaagaggcttcatcaaggcgaagaaggtcgcggtctcggccgctggc
cacacatctgttgtcatggatacggcaggcgtgcgtctgccgctcgaaagctatccgctg
caggcgctggtgtcggaaccgatcaaaccgatcttcccctgcgtggtcatgtcgaatgcg
gtccacgcctatatcagccagtccgacaagggcgaactggtgatcggttcgggcacggat
cagtacacctcctattcgcaacgcggcggcctgccactgatcgaacatacgatcgcggcc
atcgtcgagatcttcccgatcttcaaccgcatgcgcatgctgcgcaaatggggcggcatc
gttgatgtcacgccggatcgttcggccattctcggcaagacgccggtcgaggggctctac
gtcaattgcggctggggcacgggcggtttcaaggccacgccgggcgctgcccataccttc
gcctggaccattgccaaaaacgaaccgcatccgatcaacgcgccgttcacgctggaacgc
ttccgctctggccgactgatcgacgaggccgccgccgccgccgtggcgcattaa
DBGET
integrated database retrieval system
