Agrobacterium fabrum: Atu5307
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Entry
Atu5307 CDS
T00070
Name
(GenBank) related to citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
atu
Agrobacterium fabrum
Pathway
atu00020
Citrate cycle (TCA cycle)
atu00630
Glyoxylate and dicarboxylate metabolism
atu01100
Metabolic pathways
atu01110
Biosynthesis of secondary metabolites
atu01120
Microbial metabolism in diverse environments
atu01200
Carbon metabolism
atu01210
2-Oxocarboxylic acid metabolism
atu01230
Biosynthesis of amino acids
Module
atu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
atu_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
atu_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
atu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Atu5307
00630 Glyoxylate and dicarboxylate metabolism
Atu5307
Enzymes [BR:
atu01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
Atu5307
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
HTH_29
HTH_22
HTH_7
HTH_8
HTH_23
HTH_psq
MerR
HTH_28
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AAK90682
UniProt:
Q7D3E2
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All DBs
Position
At:300592..301812
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AA seq
406 aa
AA seq
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MVNLDLYNQYEIIMRHSDKFMTADRAAAELGISRATLYAYVSRGMIHTSDAADDPRRRLY
SAHDIEALKKRKNVGRRPRQVAAAALDWGLPVLESAITEIAEGQLRYRGQDALALSQAAS
LEDVARLLWDCGEVDPFDDLKAAPTPWPQPVLDYVRDLPLTERCQALLPLLEAGRVTTWR
RDNRRLWPGAAALLRGIAGACISSQPKTQAVHLSLADAWQTDAAGADLIRRALVLQADHE
LNTSAFAVRVVASTGASLGACLNAGLSALSGPLHGGMTSLVEILFDELDRYGDVERVIDE
RLRRGEAIPGFRHPLYPDGDPRATGLLLYLPPDAQRDELLQMMNDTTGQLPTCDVALVSL
RRSLKLPRGAALALFAVARTVGWVAHALEQKLDDKLIRPRARYIGR
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggtcaatcttgatttatataatcaatacgagatcatcatgcggcattccgacaagttc
atgaccgccgatcgcgctgcggccgagttgggcatcagccgtgcaacgctttatgcctat
gtaagccgtggaatgatccacacgagcgacgcagccgatgatccgcgccgcaggctgtac
agcgcacatgacatcgaagcgctgaagaagagaaaaaacgttggacggcgtcctcggcag
gtggctgcggctgcgcttgactgggggttgcccgtgctcgagtccgccattaccgaaatt
gcggagggccagttacgttatcgcggtcaggacgctcttgctctttcgcaggcggcgagc
cttgaggacgttgcccggctgctatgggactgcggcgaagttgatccattcgatgatcta
aaagctgccccaacgccgtggccacagccggtactcgactatgtcagagatctgccactg
acagagcggtgccaggcgcttctccctcttttggaagcgggccgggtgaccacctggcgg
cgtgacaaccggcgtctttggcctggtgccgcagccttgttgcggggcatcgccggtgcc
tgcatctcaagccaaccgaagacgcaagcagttcacctgtccctcgcggacgcatggcag
acggacgcggcaggtgcggatctcattcgccgggccctggttctacaggccgatcacgaa
ctcaatacctcggcatttgcggtgcgcgtcgtagcttcgacgggcgcatcgctgggggcg
tgcctgaatgcggggctttccgcgctgagcggccccctgcatggcggcatgacaagcctt
gtcgaaattttattcgacgagctggatcgatatggggatgtcgagcgggtcatcgacgaa
cgcttgcgtcggggtgaagccattcccggctttcgtcatccgctctatccagacggcgac
cctcgagcgactggcctgttgctctatctcccgccggatgctcaacgcgacgagcttctg
caaatgatgaacgatactaccgggcaactgcccacctgcgatgtggcgctcgtcagcctc
cggcgaagcctgaagctgcctcgcggtgcggcgcttgcactttttgccgtagcacgaact
gtcggctgggtcgcccatgcactggaacagaagctggatgacaaactcattcgaccccgg
gcccgttacatcgggcgatag
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