Acidithiobacillus thiooxidans: GCD22_00207
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Entry
GCD22_00207 CDS
T06281
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx02020
Two-component system
atx02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GCD22_00207 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GCD22_00207 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atx03021
]
GCD22_00207 (rpoN)
Transcription machinery [BR:
atx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCD22_00207 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QFX94748
UniProt:
A0A5P9XLS7
LinkDB
All DBs
Position
194497..195930
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AA seq
477 aa
AA seq
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MKQGLELKLGQHLAMTPQLQQAIRLLQLSTVDLQQEVQGMLESNPLLDEDVSGEETGVPG
SAPEPGESSGEDRQLDLAAEDTLPDDLPVDSQWDDVFDLGTSASGGGSDDELPDFEARNS
HSQSLQDYLRWQADMTHFSPEERNMAEMIIDAIDDRGYLVENPDDLAAAMGADAAVFQAV
LLRVQDFDPPGVAARDLSECLLLQLRQLTDVDASVQKLAMDVVKDHLQALGRHDYPRLCA
SLGVDEGMLGAAMALISALNPKPGEEVGSENTEYVIPDVIVRWSGKRLRVDLNPEAMPKL
RINRRYAGMAGGKDAAHKYIQDQLNEARWFIKSLQSRQETILKVARAIVDKQKDFFSNGP
ESMRPMVLRHIAETVEMHESTVSRVTNQKYMVTPRGLFEFKYFFSSHVGTDSGGSASATA
IRALLIKLTQAENPKHPLSDAEIAKVLADQGIQIARRTVAKYREAANIPPASQRRRL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaggtttagaactcaaactcggtcagcatttggccatgaccccgcagctgcag
caggccatccgcctgctgcagttatcgacggttgatctgcaacaggaagttcaggggatg
ctggaaagcaatcctcttctggatgaggacgtatccggtgaagaaaccggagtccccggc
agcgctccagaacccggtgaaagctccggtgaagatcgccagctggatctggctgcggaa
gatactttgcctgatgatttgccggtcgacagccaatgggatgacgtgtttgatctgggc
accagtgcatcaggtggaggttctgatgatgagcttcccgactttgaagcacggaacagt
cacagtcaaagtcttcaggattatctgcgctggcaggcggatatgacgcacttcagtcct
gaggagcgcaacatggcggagatgatcattgatgccattgatgatcgcggttatctggtt
gaaaatccagacgatctggctgctgctatgggtgctgatgctgccgttttccaggcggta
ttgttgcgcgttcaggactttgaccctcccggtgtggcggcgcgtgatctgagtgagtgt
cttttgttgcagctcaggcagttgacggatgtagacgccagcgtgcaaaagttggcgatg
gatgttgtcaaagaccatttgcaagccctgggtcgccatgattatccacggctgtgcgcc
agtctgggggttgatgagggcatgctgggagcagccatggcgctcatttccgccctcaac
cctaaaccgggtgaagaagtcggaagcgaaaataccgagtatgtcattcccgatgtgatt
gtgcgctggtccggaaagcgtctgcgggttgacctgaaccctgaggccatgcccaagctg
cgcatcaaccgccgctatgcgggcatggccgggggcaaagatgccgctcataaatatatt
caggatcagctcaatgaggcacgctggtttatcaaaagcctgcaaagtcgtcaggaaacc
attttgaaagtggctcgggcaattgtggataagcagaaggatttttttagcaacggtccg
gaatccatgcgccccatggtgctgcgccatatcgctgaaaccgtggaaatgcatgaatcc
acggtttcccgggtgaccaaccagaaatacatggttactccccgaggtcttttcgagttc
aagtactttttttccagtcatgtgggaacagacagtggcggctcagcatcagcgacggcc
attcgcgccctgctcatcaaattgacccaggcggaaaatcccaaacatcctttaagtgat
gcagaaattgccaaggttctcgccgatcagggcattcagattgcccgccggacggtagcc
aaatatcgggaagcggctaatatcccgccggcaagccagcgtcggcggctttag
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