Acidithiobacillus thiooxidans: GCD22_00482
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Entry
GCD22_00482 CDS
T06281
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCD22_00482 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atx03019
]
GCD22_00482 (pnp)
03016 Transfer RNA biogenesis [BR:
atx03016
]
GCD22_00482 (pnp)
Enzymes [BR:
atx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GCD22_00482 (pnp)
Messenger RNA biogenesis [BR:
atx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GCD22_00482 (pnp)
Transfer RNA biogenesis [BR:
atx03016
]
Prokaryotic type
tRNA degradation factors
GCD22_00482 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
Motif
Other DBs
NCBI-ProteinID:
QFX94995
UniProt:
A0A5P9XLZ6
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All DBs
Position
438027..440105
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AA seq
692 aa
AA seq
DB search
MAIIRKELDFGGQRLHLETGRMARQADGAVLVSSGDTVVLVTAVGRREMKPGQDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPTEKETLTSRLIDRPIRPLFPKGFMNEVQVIATVLSVD
RDHDPDILAMLGASAALAISGIPFRGPIGGARVGYVNGQYVLNPSAAQLAESQLDLVVAG
TRNAVLMVESEAQQLSEEVMLEAVMFGHAGFQPVIEAIEALAHEVGKTSWNWVAPVADEA
LGQQVQAKASGLLQEAYSLVEKQARSKKLEEIQQHMVAELALEDAQLADMVRGFVKKIET
GIVRGRILDGAPRIDGRDTKTVRPITIEAGVLPRTHGSALFTRGETQALVVATLGTKGDE
QIIDALQGESRDRFMLHYNFPPFSTGETGMVGSPKRREIGHGRLAKRAVAAVLPEASEFP
YSLRVVSEVLESNGSSSMATVCGASLALMDAGVPLKAPVAGVAMGLIKEGERFAVLTDIL
GDEDHLGDMDFKVAGTEQGVTALQMDIKIDGITREIMAAALKQAHAGRLHILGLMNAVLE
KGRVELSDNAPRIITIHINPDKIRDVIGPGGKVIRALTEETGAAIDIQDNGTVTIATVDS
EAGAAARRRIELLTAEVQVDTIYDGKVAKIMDFGAFVTILPGRDGLLHISQISSERVSDV
HDYLKEGQAVRVKVLEVDRQGKIKLSMKDITQ
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttggccatcattcggaaagagttggatttcggcggacagcgcctgcatctggaaacaggt
cgtatggcgcgtcaggctgatggggcggtactggtttccagtggcgacacagtggttctg
gtgacggccgttggccgtcgtgaaatgaaacccggtcaggacttcttccccttgacggtc
aattatcaggaaaaagcctatgctgccggtaaaattccggggggcttcttcaagcgcgaa
ggtcggccaactgaaaaagaaaccctgacctcgcgactgattgatcgacccattcgtccc
ttgtttcccaaaggcttcatgaatgaagtgcaggtcatcgccacggttctttctgtggat
cgcgatcatgacccggacattctggcgatgcttggtgcttcggcagccttggcgatttcc
ggtattccgttcagaggtcctattgggggcgcccgggtgggttacgtcaatggacaatat
gtcctgaatcccagcgctgcccaattggctgaatcgcagttggatctggtcgtggccgga
acccgtaatgcggtgttgatggtggaatcagaagcccagcaactgtctgaagaagtaatg
cttgaggccgtcatgtttgggcacgccggattccagccggtcattgaggctattgaggcc
ctggcccatgaagtgggtaagaccagctggaactgggtggcacccgtagccgatgaggct
ttgggtcagcaggtgcaggccaaggcttcgggcttgctgcaggaagcctactcgttggta
gaaaaacaggcgcgtagtaaaaagcttgaagaaattcagcagcacatggttgcagaatta
gccttagaagatgcgcagctggcagacatggtgcgtggttttgttaaaaaaatcgaaacc
ggtattgtccgggggcggattctggatggtgcgccgcgcattgatgggcgggacaccaag
accgtgcgacccattacgattgaggcgggggttttaccccgcacccatggttcggccctg
tttacccggggtgaaacccaggctctggtcgtcgcaactttgggaaccaagggcgatgag
cagattatcgacgctcttcagggagaaagtcgtgatcgcttcatgctccattataatttc
ccgccattttccaccggcgaaacgggcatggtggggtcacccaaacgccgtgaaattggt
cacggtcgtctggcaaaacgggcagtagccgcagtgttgccggaagccagcgaatttccc
tacagcctgcgggtggtttcagaagtgctggagtccaatggttcttccagtatggctacg
gtgtgcggcgcttcattggccctgatggatgccggtgttccgttgaaggctcccgttgcc
ggagtcgccatgggactgatcaaggaaggtgagcgttttgcggtcctgaccgatatcctg
ggtgatgaagatcatctgggtgacatggatttcaaggtggcgggtaccgaacagggtgtg
actgccctgcagatggatatcaaaattgacggtattacccgtgaaatcatggctgcagcc
ctaaaacaggcccatgccggacgtcttcatattctgggtctgatgaatgcagtactcgaa
aaaggccgcgtcgaactttcggataacgccccgcgcattattaccatacacatcaacccg
gacaaaatccgtgatgtcatcgggccgggcggtaaagtcattcgcgccttgacggaagaa
accggtgctgccattgatattcaggataatggtacggtcaccatcgccacggtggacagt
gaagccggtgctgccgcccgtcggcggattgaactgctgacggcggaagtacaggtggat
accatatatgatggtaaagtggcaaaaatcatggactttggcgcttttgtcaccattctt
ccggggcgtgatggtctgctgcacatttcccagatcagcagcgagcgggtcagtgatgtc
cacgactacctcaaggaagggcaggcagtgcgggtgaaagttctggaagttgatcgtcag
ggcaaaatcaagctcagcatgaaggacattacccagtaa
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