Acidithiobacillus thiooxidans: GCD22_02597
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Entry
GCD22_02597 CDS
T06281
Symbol
yrrC
Name
(GenBank) recombinase RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
atx
Acidithiobacillus thiooxidans
Pathway
atx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCD22_02597 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atx03400
]
GCD22_02597 (yrrC)
Enzymes [BR:
atx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GCD22_02597 (yrrC)
DNA repair and recombination proteins [BR:
atx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCD22_02597 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
nSTAND3
HHH_2
UvrD-helicase
T2SSE
AAA_29
RsgA_GTPase
AAA_16
NTPase_1
AAA_22
AAA
PIF1
DEAD
SLFN-g3_helicase
NACHT
PhoH
TrwB_AAD_bind
Herpes_Helicase
AAA_28
ABC_ATPase
ABC_tran
AAA_23
AAA_7
ATP_bind_1
cobW
UvrD_C
AAA_5
AAA_14
SMC_N
TsaE
RuvB_N
ATPase_2
CbiA
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QFX96774
UniProt:
A0A5P9XT82
LinkDB
All DBs
Position
complement(2298503..2300686)
Genome browser
AA seq
727 aa
AA seq
DB search
MAKSERPQQDVPTELLGGLIERVTFHNDNNGFCVLRIKARGHRDLVTLVGHAAAVTAGEW
ITASGIWVTDRDHGLQFKAAFLKVSAPTSREGIEKYLGSGMIRGIGPVYAKKLVKAFGEQ
VFTVIEETPERLAEVDGIGPIRRERMVAAWADQKVIREIMLFLHTHGVGTARAVRIFKTY
GIDAVRIMTENPYRLARDIHGIGFKTADAIAMKMGIAQNAPIRVQAGISYALMEARDDGH
CGLPHEALTPLAEQLLEVPIDAIEAAIAAEIQEGTLIADQVQNTPGVFLAPLYRNEQGIA
QILKKLCAGQAPWSGIAADAAMDWVQKRLDIVLADSQKAAIRMVLQEKVALITGGPGVGK
TTLVNAILHILDAKKLRIVLAAPTGRAAKRMSETTGKEAKTIHRLLEINPLGGGFKRRED
YPLECDLLVLDECSMIDVPLMHALLKALPPTAGLLMVGDPDQLPSVGPGQVLADLIAAQT
LPEVHLTEVFRQAAQSRIIRAAHQIHAGHLPDLRPPEKLSDFYFIDVEDPAEAADKLVKV
VTTHIPRRFHLNPLRDIQVLCPMNRSALGARALNDALQTALNGESTPLVEKFGRRFAPGD
KVMQIQNDYEKDVFNGDIGFVQAVDTEENTLTVDFEDRMVSYGFGELDLLQPAYAITVHK
SQGSEYPAVVIPLSTQHYPMLQRNLLYTAVTRGKTLVILIGQKKAVAMATRNGSSKRRWT
KLCDWMI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggctaaatcggagcgcccccagcaggatgtgcccacagaactcctgggcggcctgatt
gagcgggtgacctttcataacgataacaatggcttttgcgtcctgcgcatcaaggcccgt
ggtcatcgggacttggtcaccctggtgggccacgcagcggcggttacggccggtgaatgg
atcaccgcatccggtatctgggtcaccgatcgcgatcacggcctccagttcaaggcggcc
tttttgaaagtgtctgcacccaccagcagagagggtatcgaaaagtatctgggctccggc
atgatccggggcattggtccggtttatgccaaaaagcttgtgaaagcatttggagaacag
gtattcacggtgatcgaagaaaccccggaaagactggctgaggtggacggaatcggcccc
attcgccgggaacggatggttgccgcctgggcagaccagaaagtgatccgggagatcatg
ctgttcctgcatacccatggggtaggtactgcccgcgctgtacggatttttaaaacctat
ggcatcgatgctgtccggataatgacagaaaacccctacaggctggcccgggatatacat
gggataggcttcaaaacggccgatgccatcgccatgaaaatgggtatcgcgcaaaatgcc
cccatacgggtgcaagccggtatttcctatgcgctgatggaagcccgggatgacggtcac
tgtggattaccccacgaggcattgacccctctggcagagcaattactggaagtaccaatc
gacgccatcgaagcagccatagcagccgaaatacaggaggggaccctcatagccgaccag
gtgcagaacacccctggggtttttctggcccccttataccgcaacgaacaaggcatcgcc
caaatcctgaaaaaactctgtgcgggccaggcgccgtggtcgggcattgccgctgatgcg
gcgatggattgggtgcaaaaaaggttggacattgtcctggccgatagccaaaaagcggcc
atccgtatggtgttgcaggaaaaagtggctctgattaccggcggtccaggcgttggtaaa
accaccctcgtgaatgccattctccatatcctggatgccaaaaagttgcgcattgtcttg
gcggccccgaccggacgagccgctaaacggatgagtgaaacaacgggcaaagaagccaag
accatccatcggcttttggaaattaatccgctgggcggtggtttcaagcgccgggaagac
tatcccttggaatgtgatctgctggttctcgacgaatgctccatgattgatgtcccgttg
atgcatgcgctgctcaaagccttgccgccgactgcagggctgttgatggtaggggatccc
gatcagctcccttctgttggacctgggcaggtactggcggatctgattgccgcgcaaaca
ctccccgaagtgcatctgacggaagtttttcgccaggccgcacaaagccggattattcgg
gcggcccaccagatccatgccgggcacctccctgatctccgtccacccgaaaagctcagt
gatttctattttattgacgtagaggatcccgctgaagcggctgacaagctggtgaaagtg
gtgacgacccatatcccccgacgttttcacctgaaccccttgcgcgacattcaggtgctc
tgccccatgaatcgtagtgcgttaggtgctcgggcactcaacgacgctctgcagacggcg
ttgaatggtgaaagcacaccgctagtcgaaaagttcggtcggagattcgcgcccggtgat
aaggtcatgcagattcagaatgactacgaaaaagacgtcttcaacggcgacatcggattt
gtgcaggcggtagataccgaagaaaacaccctgactgtggactttgaggatcgtatggtc
agctatggtttcggggagttggatctgttgcaaccggcctatgccatcacagtccacaag
agtcagggctcggaatatcccgcagtggtgattcctctgagtacgcaacactatcccatg
ctgcagcgtaacttactatacacagcggtaactcggggcaagacgctggtgatactcatt
ggccagaagaaagcggtagccatggcgacacggaacggttccagtaaaagacgctggaca
aaactatgcgattggatgatatga
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