Aerococcus urinaeequi: APT62_08945
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Entry
APT62_08945 CDS
T04249
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aui
Aerococcus urinaeequi
Pathway
aui03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aui00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
APT62_08945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aui03021
]
APT62_08945
03400 DNA repair and recombination proteins [BR:
aui03400
]
APT62_08945
Enzymes [BR:
aui01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
APT62_08945
Transcription machinery [BR:
aui03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
APT62_08945
DNA repair and recombination proteins [BR:
aui03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
APT62_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ALZ88560
UniProt:
A0A0U4VZD4
LinkDB
All DBs
Position
complement(1931119..1934700)
Genome browser
AA seq
1193 aa
AA seq
DB search
MTGHNVNFGKHRVRRSYSRINEVLELPNLIEIQTDSYKWFLDQGMKEMFEDISPIEDHAG
KLALEFVDYSFKEAKYNLAEARAHDTNYSAPIYVKLRLMNKETGEIKDQEVFFGDFPLMT
DGGTFIINGAERVIVSQLVRSPGVYFHDKLDKNGRQSFGTTVIPNRGAWLEMETDAKNIS
YVRIDRTRKVPMSVLMRALGFSSDDQIREIFGESETLELTLEKDVHKDLSDSRTEEALKE
IYERLRPGEPKTADSSRNLLTARFFDPRRYDLAAVGRYKVNKKLDIKNRLFNQILAETLV
DPETGEILADKGTELNREVMDKLEPYFDNGLNVTTLYPNDDAVLTEPVDLQIVKIQAPKD
ADRVINVIGNAGPGKEARALTIADVLASLNYFLGLYEGIGKTDDIDHLGNRRIRSVGELL
QNQFRIGLSRMERVVRERMSIQDIEKVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINNLASYAK
INEFGFIETPYRRVDWNTHKVTDRIDYLTADEEDNFVIAQGNSILNEDGSFAEEVVMARY
VEENIEVKPERVDYMDVSPKQVVSVATASIPFLENDDSNRALMGANMQRQAVPLLQPHAP
LVGTGMEHKAAADSGAAVVAQYDGVVEYVDAREIRVRREDGALDKYPLIKYHRSNASASY
NQTPNVTIGENVTAGEILANGPSMEKGEMALGQNPLIAFMTWDGYNYEDAVIMSERLVKD
DVYTSIHIDELESEARDTKLGPEEITREIPNVGEDSLRNLDERGIIRIGAEVHDGDILVG
KVTPKGVTELSAEEHLLHAIFGEKAREVRDTSLRVPHGGGGIVNDVKVFYRENGDELSPG
VSMLVRVYIIQKRKIQVGDKMAGRHGNKGVVSRILPQEDMPYMPDGTPVDIMLNPLGVPS
RMNIGQVLELHLGMAAREMGIHIATPVFDGANEEDVWETIKEAGMASDAKTVLYDGRTGE
PFDNRVSVGVMYYLKLSHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVQTYEAIVKGEPIPKPGVPESFRVLVKELQSLGLDIEV
LDSDKKAVDLRDMDEVTPGFPKKDQENKENAVDADATVESQASEITAQKQVNE
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgactgggcataatgtcaatttcggtaaacatcgcgtgcgccgcagttactcacgtatt
aatgaagtgctagaattgccaaacttgattgaaatccaaacggactcatacaaatggttc
ttggatcaagggatgaaagaaatgtttgaggacatttctcctattgaagatcatgctggt
aaattagccttagaatttgttgattattcatttaaagaagctaaatacaacttagcagaa
gcgcgtgcacatgacacaaactactcagcgccaatttatgttaaattgcgcttaatgaat
aaagaaactggtgaaatcaaggatcaagaagtattcttcggtgatttcccactaatgact
gacggtggtacgtttatcatcaacggtgcggaacgtgtaatcgtttctcaattagtgcgt
tctccaggtgtctacttccacgacaaattagataaaaatggtcgccaatcatttggtacc
actgtaatccctaaccgtggtgcatggttagaaatggaaacagatgcgaaaaacatctct
tacgtacgtattgaccgtacacgtaaagtgccgatgtcagtgttgatgcgtgcattaggt
ttctcttctgatgaccaaattcgtgaaatcttcggagaaagcgaaacattagaattaact
ttagaaaaagatgtccacaaagacttatctgattctcgtacagaagaagcattaaaagaa
atttacgaacgtctacgtccgggcgaaccaaagactgcagactcatctcgtaacttatta
actgctcgtttctttgacccacgtcgctatgacttagcagctgttggtcgttacaaagta
aacaaaaaattagatatcaaaaaccgcttattcaaccaaatcttggctgaaactttggtt
gacccagaaactggtgagatcttagcggataaaggtactgaattaaaccgtgaagttatg
gacaaattagagccatattttgacaatggtttaaacgtgacaacattgtatccaaatgac
gatgctgttctaacagaacctgttgatttacaaatcgttaaaatccaagcacctaaagat
gctgaccgtgtaattaacgttattggtaacgcgggcccaggcaaagaagctcgtgcctta
acaattgctgacgtgttagcttcattaaactacttcttaggtttatatgaaggtattggt
aaaacagacgacatcgaccatttaggtaatcgtcgtatccgttcagttggtgaattatta
caaaaccaattccgtatcggtttatctcgtatggaacgtgttgtacgtgaacgtatgtct
atccaagacattgaaaaagtaacgccacaacaattaatcaacattcgtccagtcgttgcg
tcaattaaagagttcttcggttcttctcaattgtctcaattcatggaccaaaccaaccca
ttaggtgagttgacgcacaaacgtcgtctatctgccttaggacctggtggtttgactcgt
gaccgtgccggatacgaagttcgtgacgttcactattctcactatggtcgtatgtgtcca
atcgaaacacctgagggaccaaacatcgggttgatcaacaacttggcgtcatatgcgaaa
atcaatgaatttggtttcattgaaacaccttaccgtcgtgttgactggaacacacataaa
gtaacagaccgtatcgactacttaacagctgacgaagaagataatttcgttatcgcccaa
ggtaactctatcttgaacgaagacggttcattcgcagaagaagttgttatggctcgttac
gttgaagaaaatatcgaagtgaaacctgaacgtgtagactacatggacgtttcacctaaa
caagtagtatctgttgcaacagcatcaattcctttcttggaaaacgatgactctaaccgt
gccttaatgggtgccaacatgcaacgtcaagctgtgccattgttacaaccacatgcacca
ctagttggtactggtatggaacataaagcagcagctgactcaggtgctgcagtcgttgca
caatacgatggtgttgttgagtatgttgatgcacgtgaaatccgcgtacgtcgtgaagat
ggtgctttagacaagtatccattaatcaaataccaccgttcaaatgcctcagcatcttac
aaccaaacgcctaacgtgactattggagaaaacgtaactgctggagaaatcctagcaaac
ggtccttcaatggaaaaaggggaaatggctttaggtcaaaaccctctgatcgccttcatg
acttgggatggttataactacgaggatgcggttatcatgtctgaacgtttagttaaagac
gatgtctacacttctattcatattgatgaattagaatctgaggcacgtgatactaaacta
ggacctgaagaaatcacacgtgaaatccctaacgtaggtgaagattctctacgtaacttg
gacgaacgcggtattatccgtattggtgctgaagttcatgacggtgacatcttagttggt
aaagtaacgcctaaaggtgtaactgagttatcagcagaagagcacttattacatgcgatc
tttggtgaaaaagcacgtgaagttcgtgatacatcattacgcgtaccacatggtggtggc
ggtatcgttaacgacgtgaaagtattctaccgtgaaaacggcgacgaattatcaccaggt
gtttctatgttagttcgtgtatacattatccaaaaacgtaagattcaagttggggataaa
atggccggacgtcatggtaacaaaggggttgtgtctcgtatcttacctcaagaagacatg
ccttacatgcctgacggaacaccagttgatatcatgttaaaccctctaggggtaccttct
cgtatgaacatcgggcaagtattagagttgcacttaggtatggctgcacgtgagatgggc
attcatattgcaacaccagtatttgatggtgcgaacgaagaagatgtatgggaaacaatc
aaagaagcaggtatggcaagcgatgctaaaactgttctttacgatggtcgtacaggtgaa
ccgttcgacaaccgtgtttctgtaggggttatgtactacttgaaactttctcatatggtc
gacgacaaattacatgcgcgttcaacaggtccttactcacttgttacacaacaacctttg
ggtggtaaagcacaatttggtggacaacgtttcggtgagatggaggtttgggcactagaa
gcatacggtgcggcatacacattacaagaaatcttgacttacaagtcagatgacgttgta
ggacgtgtacaaacatacgaagctatcgttaaaggtgaaccaattccaaaaccaggtgta
cctgaatcattccgtgtattggttaaagaattgcaatcattaggtctagacattgaagta
ttagactctgataagaaagcagtagatttacgtgacatggatgaagtaacaccgggcttc
cctaaaaaagatcaagaaaacaaagaaaatgcagttgatgcagatgcaactgttgaatca
caagcaagtgaaatcactgcacaaaaacaagtaaacgaataa
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