Aurantimicrobium sp. MWH-Uga1: AURUGA1_01055
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Entry
AURUGA1_01055 CDS
T05539
Symbol
rnhB
Name
(GenBank) Ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
auw
Aurantimicrobium sp. MWH-Uga1
Pathway
auw03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
auw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AURUGA1_01055 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
auw03032
]
AURUGA1_01055 (rnhB)
Enzymes [BR:
auw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
AURUGA1_01055 (rnhB)
DNA replication proteins [BR:
auw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
AURUGA1_01055 (rnhB)
Elongation factors (archaeal)
AURUGA1_01055 (rnhB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
AXE54738
UniProt:
A0A344W3F1
LinkDB
All DBs
Position
complement(1045000..1045629)
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AA seq
209 aa
AA seq
DB search
MPVEPSLRVEAEMFASGARLIIGIDEVGRGAMAGPVMVGVCAIGPSVTEFPSGLRDSKLV
SAKKRTALFPEVQAWAPTAVGEASALEIDELGITACLGLAAKRALTMLHHDGVSVGEATV
LLDGSHDWLNPALSSKLPVVTRVKADQDCAVVSAASIVAKVTRDELMVSLDSEHPEYGWA
SNKGYGAAVHMEAIKTRGLTPYHRASWVK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgaaccatcccttcgtgtcgaggcggaaatgtttgcttctggagccaggctg
attatcgggatagatgaggtcggccgtggagcaatggcaggaccagtcatggtgggggtg
tgtgccattggcccttcagttacagagtttccctcgggactgcgtgactcaaaactcgtt
tctgcaaagaagcgcactgcactctttcctgaagttcaggcctgggcgcccactgccgtt
ggcgaagcatctgcgcttgagattgatgagctggggatcactgcttgtttgggactagcg
gcaaaacgagcactgacgatgcttcaccatgacggtgtttctgtgggggaggccacagtc
ttgttggatggttcgcacgattggctcaaccccgctttaagcagcaaacttcctgtcgtc
acgagggtgaaagcagatcaggattgtgcagtagtttctgctgcatcaattgttgccaaa
gtgactcgtgacgaattgatggtttctctggatagtgaacatcctgagtatggctgggcg
tcaaataaaggctacggtgctgcagtgcacatggaagccatcaaaacgagaggcctcacc
ccatatcaccgcgcaagttgggtgaagtaa
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