Trichormus variabilis: Ava_0965
Help
Entry
Ava_0965 CDS
T00277
Name
(GenBank) Rare lipoprotein A
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ava
Trichormus variabilis
Brite
KEGG Orthology (KO) [BR:
ava00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Ava_0965
Enzymes [BR:
ava01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Ava_0965
Peptidoglycan biosynthesis and degradation proteins [BR:
ava01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Ava_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
ABA20589
CyanoBase:
Ava_0965
UniProt:
Q3MEJ7
LinkDB
All DBs
Position
complement(1167013..1168128)
Genome browser
AA seq
371 aa
AA seq
DB search
MNQRHLWTIVALSVTVLGTPAVGRTQTTKATAPAEQILASDVVKVGEFQSSEGKRTSDAV
ITSIHPHNLGGRRAATLFIRKIPVLTFVSSNPVASVETKVGAIGDTEGVQSYALNTEKSV
QVASLGNLADARIQNRSQNDDPVKRASLVAAKINQLIRNNVKADQITVSWKGEDSSLVAS
QSQNKSSSNQQKLERYTIKFNNQELVEINQNTRLADSTNNLANDALQATNRLRRLLGNAS
PLKEIANLPARSPKRSSNPIANLPQRIASSIRLSFQGIASFYGHGDGFAGKPTATGERFN
PEAMTAAHRSLPFGTRVRVTNTRNGRSVVVRINDRGPFTRGRVIDLSTGAARLLGMIGSG
VAPVRIEVLGR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaagacatttgtggactattgttgccctatctgtaactgttttgggtacgccc
gcagtcggtcggactcaaactactaaagctacagcaccagctgagcaaattctagctagt
gatgtagtcaaggtaggagagtttcaatcatcagaagggaaaagaacctcggatgctgtg
attacgagcattcatccccataatcttggaggtcgtagggcggcaaccctatttattcgg
aaaattccagttctcacctttgtaagttctaacccagttgccagcgtggagacaaaagta
ggagcaattggagatactgagggcgtgcaatcgtacgcccttaatactgagaaatcagtt
caggtggcaagtctggggaatttagcggatgccagaatccagaaccgttcgcaaaatgac
gatccagttaaaagagctagtttagtagcagcaaaaatcaaccagctcatcagaaataat
gtcaaagctgaccagattaccgtaagttggaagggcgaagactcttcattagttgcctct
caatctcaaaataaaagttcttccaatcaacaaaagttagagcgttataccatcaaattc
aataatcaagaattggtggaaattaatcaaaacacaaggctagcagattccaccaacaat
cttgctaacgatgcgctgcaagcaactaatcgtctgcggagacttttaggtaatgcttcg
cctctcaaagaaatcgctaatttaccagcacgctcaccaaaacgttcctcaaaccctata
gcaaatctgccgcagcgaattgctagcagtatcagacttagtttccaagggatagcttcc
ttttatggacatggagatgggtttgctggcaaaccaaccgctactggtgagagatttaat
ccagaagccatgacggctgctcatcgtagcttacctttcggcacaagagtccgtgttacc
aatacccgtaatggtcgttctgtagtggtgcgtatcaacgaccgggggccatttactcgt
ggccgagtgattgatttatccacaggtgcagccagactgctaggaatgatcggtagtggt
gttgcaccagtaaggattgaagttttgggaagatag
DBGET
integrated database retrieval system
