Trichormus variabilis: Ava_5024
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Entry
Ava_5024 CDS
T00277
Name
(GenBank) transcriptional regulator, LysR family
Organism
ava
Trichormus variabilis
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ABA24621
CyanoBase:
Ava_5024
UniProt:
Q3M315
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Position
6312055..6312990
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AA seq
311 aa
AA seq
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MTLEQLRIFLAVAEMLHFTRAAEALYITQPAVSAAIQSLETEYGVRLFHRIGRHIEITDA
GKLLQGEAQKIIDHVQLTERGLKELNNLQRGELKIGASLTVGNYWLPEKISQFKQLYPGI
FINCQLGNAEEICDGTAVGMYDLGLVTGEIKASLRQSLEQDEVGSDRLHIVVGKSHPWFQ
YNEIYLDELFRTSWVMRESGSGAQQMFEQALQSWGIEPSRLNVVLNLNTSEMVKAVVESG
VGASALPESMVKKELQLGTLRAVQIINPQKQSKTELEIIQPIWKLKHRQRFHTRVMMAFE
DMLMQDNVQVA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctagaacagttacgcatttttttagctgtggcggaaatgctgcactttacccgt
gcagctgaagcactttatattactcaaccagcagttagtgctgctattcaaagcttagag
acagaatatggtgtcagattatttcatcgcattggtcgtcatattgaaatcacagatgct
ggtaaattattacaaggtgaggcgcaaaagattattgaccatgtacagttaacagagcgc
ggtttgaaggaattaaataatctgcaacggggagaattaaagataggtgcaagtctcacc
gtgggtaactattggttacccgaaaaaattagccagttcaagcagttatatcctggcatt
tttatcaattgtcagttgggaaatgctgaggagatttgtgatggaactgctgtaggtatg
tatgatttgggtttagtgacaggggagattaaagcatcattacgacaatctttagagcaa
gacgaagtaggaagcgatcgcctacacattgttgtgggtaaatctcacccttggtttcag
tataatgagatttatctagatgaattattccgtacaagttgggtgatgcgtgaatctggt
tctggcgcacagcagatgtttgagcaagccttacaaagttggggaattgagcctagtcgc
ttaaatgttgtacttaatctcaacactagtgaaatggtaaaagcagttgtagaaagtggt
gttggcgcatctgcacttccagaatcaatggtcaagaaagaattacaactagggacatta
cgcgctgtgcaaattatcaacccacagaaacaatccaagacggaattagaaattatccag
ccaatttggaaactaaaacaccgtcaacggttccatacacgagtcatgatggcttttgaa
gatatgctcatgcaggataatgtacaagtggcctag
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