KEGG   Archaeoglobus veneficus: Arcve_0580Help
Entry
Arcve_0580        CDS       T01451                                 

Definition
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ave  Archaeoglobus veneficus
Pathway
ave03030  DNA replication
ave03410  Base excision repair
ave03420  Nucleotide excision repair
ave03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ave00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Arcve_0580
   03410 Base excision repair
    Arcve_0580
   03420 Nucleotide excision repair
    Arcve_0580
   03430 Mismatch repair
    Arcve_0580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ave03032]
    Arcve_0580
   03400 DNA repair and recombination proteins [BR:ave03400]
    Arcve_0580
Enzymes [BR:ave01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Arcve_0580
    6.5.1.6  DNA ligase (ATP or NAD+)
     Arcve_0580
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Arcve_0580
DNA replication proteins [BR:ave03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    Arcve_0580
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     Arcve_0580
DNA repair and recombination proteins [BR:ave03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Arcve_0580
   NER (nucleotide excision repair)
    Other NER factors
     Arcve_0580
   MMR (mismatch exicision repair)
    Other MMR factors
     Arcve_0580
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AEA46601
UniProt: F2KQN9
LinkDB All DBs
Position
complement(500585..502255)
Genome map
AA seq 556 aa AA seqDB search
MLFKEFAEFCSVIEKISSTLELAARIAAFIKGIEDDNDLYNVVLFLMGKVYPPWDERELG
VGVGLIYEALRVATGTNRSKIEELIKETGDLGIAAEKLLQTKTQLTLFEEELTVAKVREV
FDTMSSLTGEGSQKRKIRLLADLYFSATPIEARYLTRLILSEMRLGVGEGIVRDAIARAW
GIEEALVERAYMITNDFGKVAVVAKNEGKEGLEKMKIELHVPVRMMLAQVAESIDQAIRE
MSRVAVEWKFDGTRVQVHWGNGKVTIYSRRLENVTRALPEIVEEIKSNVKEGVILDGEVV
AMKEGRPMPFQHILRRFRRKYEVSKMMEKIPIHAQFFDILYCDGKEVIDLPLEERRKLLE
SVVRSSDRIWVAKQVVTSDAAVIEQVYNEALNAGHEGAMLKNPKSPYIPGKRGKHWLKLK
PVMETLDLVVIGGEWGEGKRSHVISSYEIACLDPTTGKLLPVGKVATGFTDEELEEFTEL
FRPLIEYEEGKKIVLQPKYVFEVAYQEIQKSPKYESGYALRFPRFVRLREDKDVGEADTI
DRVARLYESQFKGKKT
NT seq 1671 nt NT seq  +upstreamnt  +downstreamnt
atgctattcaaagagttcgctgaattctgctcagtgatagaaaaaatttcatcaactctc
gaacttgccgcgagaattgctgcctttataaagggcattgaggacgataacgacctgtac
aacgtcgttctctttctcatgggcaaggtttacccgccgtgggatgagagagaacttggc
gttggtgttgggctcatctacgaggcgttacgtgtggcaacggggacgaacagaagcaag
attgaagaactgataaaagagacaggcgatctcggaatcgctgcagaaaagcttctccag
acgaaaacgcagcttacactcttcgaagaggagcttaccgtagcgaaggttagggaagtg
ttcgacaccatgagctctctgaccggagagggtagccagaagaggaaaatcaggttgctt
gcagatctctacttctccgcaacaccgattgaggcgaggtatctgacgaggctcatattg
agcgaaatgaggctcggagttggtgagggtattgttagggatgcgatagcgagggcgtgg
ggaatcgaggaagcgctggtggaaagggcttacatgataaccaacgactttgggaaggtt
gccgtcgttgcgaagaatgaagggaaggaaggtctcgagaagatgaaaatagaactgcac
gtgcctgtgagaatgatgctcgcccaggttgctgagagcatagaccaggcaataagagag
atgagtagagttgctgtagaatggaagtttgacggcacgagggttcaggttcactggggg
aatggaaaggtaacgatatactcgaggagactggagaacgtaacgagggcgctgccggag
atagtggaggagataaagagtaacgtgaaagagggcgttatactcgacggcgaggttgtt
gccatgaaggagggcagaccaatgcccttccagcacattctgcgacgtttcaggcggaaa
tacgaggtcagcaaaatgatggagaaaatccccattcacgcgcagttctttgacatcctc
tactgcgacggcaaggaagtgatagacctgccccttgaggagcgcagaaagcttctcgag
tctgtcgtaagaagttcagacagaatatgggttgcgaagcaggttgttacgagcgacgct
gccgtcatagagcaggtttacaacgaagccttaaacgctggccatgagggagcgatgctg
aaaaatcccaagtcgccgtatataccggggaagaggggcaagcactggctgaagctaaag
ccagtgatggaaaccctcgacctcgttgttattggtggagagtggggagagggcaagagg
agccacgtgataagctcttacgagattgcgtgtctcgaccccacaacgggaaaactctta
cccgttggaaaggttgcaaccggattcacggacgaggaactcgaggagttcaccgaactt
ttcagacccttgatagagtacgaggaagggaagaagattgttctccagccaaagtacgtg
tttgaggtagcgtatcaggagatacagaagagcccgaagtacgaaagtggatatgcgctt
cgctttccacgttttgtgaggctgagggaagacaaggacgttggcgaggctgacacgata
gacagggtagcgaggctctacgaaagccagtttaaaggtaaaaagacctga

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