Allorhizobium ampelinum: Avi_0171
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Entry
Avi_0171 CDS
T00851
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
avi
Allorhizobium ampelinum
Brite
KEGG Orthology (KO) [BR:
avi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
avi03016
]
Avi_0171 (truB)
Enzymes [BR:
avi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Avi_0171 (truB)
Transfer RNA biogenesis [BR:
avi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Avi_0171 (truB)
Prokaryotic type
Avi_0171 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACM35104
UniProt:
B9JYK8
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All DBs
Position
1:160946..161875
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AA seq
309 aa
AA seq
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MSKPRKPKGRPVSGWLILDKPVDYGSTEAVGKIKWLFNAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERSTDDLEGEATQTSDQRPTEEQIRALLPDYTGVI
NQIPPQFSAIKIAGERAYDLAREGEVVDIPSREVEIHRLTLLRADHDCADFEVECGKGTY
VRSLARDMGRDLGCYGHISELRRSFVAPFAEDMMVPLEDLVELEKIEDRDERLAALDAFL
FDTGEALMALPQIRISDDQAHRLRMGNPIILRGRDAPVAEPEAVALAGGKLVAIGEIGEG
EFRPKRVFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccagaaaacccaagggccgtccggtttccggctggctgatcctcgacaag
ccggtggattacggctcgaccgaggccgtcggcaagatcaagtggctgttcaatgcccag
aaagctggtcacgccggaacgcttgatccgttggcctccggcatgttgccgattgcgctg
ggcgatgccaccaagacggttccctacgtcatggatggccgcaagatctacgaatttacc
gtcacctggggcgaagaacgctccaccgacgatcttgaaggtgaggcaacccaaacctcc
gaccagcgcccgaccgaagaacagatccgcgctttgctgccggattataccggtgtgatc
aaccagatccccccgcagttttcggccatcaagattgccggggagcgcgcttatgatctg
gcccgcgaaggcgaggtggttgatattccctcccgcgaggtggaaattcatcggttgacc
ctgttgagggccgaccatgattgcgctgatttcgaagttgaatgcggcaagggcacctat
gtgcgctcgctggcgcgtgatatgggccgggatcttggctgctacggccatatttcggag
ttgcgacgctccttcgtcgcgccgtttgccgaagacatgatggtgccgctcgaagatctg
gtggagctggaaaagatcgaggatcgtgacgagcggctggcagccctcgatgctttcctg
ttcgataccggcgaggcgctgatggcgctgccgcagatccggatcagcgacgatcaggcc
catcggttgcggatgggcaatccgattatcctgcggggccgggatgcgccggtagccgaa
ccggaagcagtggcactggccggtggcaagctggtggcgatcggcgagatcggcgagggc
gagtttcgcccgaagcgggttttcgcctga
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