KEGG   Agrobacterium vitis: Avi_1812Help
Entry
Avi_1812          CDS       T00851                                 

Gene name
tuf
Definition
(GenBank) translation elongation factor Tu
  KO
K02358  elongation factor Tu
Organism
avi  Agrobacterium vitis
Brite
KEGG Orthology (KO) [BR:avi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:avi03012]
    Avi_1812 (tuf)
   03029 Mitochondrial biogenesis [BR:avi03029]
    Avi_1812 (tuf)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:avi04147]
    Avi_1812 (tuf)
Translation factors [BR:avi03012]
 Eukaryotic Type
  Elongation factors
   Avi_1812 (tuf)
 Prokaryotic Type
   Avi_1812 (tuf)
Mitochondrial biogenesis [BR:avi03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    Avi_1812 (tuf)
Exosome [BR:avi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Avi_1812 (tuf)
  Exosomal proteins of breast cancer cells
   Avi_1812 (tuf)
  Exosomal proteins of colorectal cancer cells
   Avi_1812 (tuf)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase cobW
Motif
Other DBs
NCBI-ProteinID: ACM36298
UniProt: B9JVL8
LinkDB All DBs
Position
1:1509896..1511071
Genome map
AA seq 391 aa AA seqDB search
MAKSKFERNKPHVNIGTIGHVDHGKTSLTAAITKYFGEYKAYDQIDAAPEEKARGITIST
AHVEYETPARHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQ
VGVPAIVVFLNKVDQVDDEELLELVELEVRELLSSYDFPGDDIPIVKGSALAALEDSNKK
IGEDAIRELMAAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEV
EIVGIRATSKTTVTGVEMFRKLLDQGQAGDNIGALVRGVQRDGVERGQILCKPGSVKPHK
KFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVSLPEGTEMVMPGDNVTVQVEL
IVPIAMEEKLRFAIREGGRTVGAGIVASIIE
NT seq 1176 nt NT seq  +upstreamnt  +downstreamnt
atggcaaagagtaagtttgagcgcaacaagccgcacgttaacatcggcacgatcggccac
gttgaccacggcaagacgtcgctgacggcagcaattacgaagtatttcggtgaatacaag
gcgtatgaccagatcgacgccgctccggaagaaaaggcccgcggcatcaccatttcgacg
gcgcacgtcgaatatgaaacgcctgcccgtcactacgctcacgttgactgccccggccac
gccgactacgtcaagaacatgatcaccggtgcagcgcagatggacggcgcgatcctggtt
tgctcggcagctgacggcccgatgccgcagacccgcgagcacattcttctggcgcgccag
gttggcgttcccgcgatcgtcgtgttcctgaacaaggttgaccaggttgacgacgaagag
cttctggagctggtcgaactggaagtgcgcgaacttctgtcgtcctacgacttcccgggc
gacgatattccgattgtcaagggttcggctcttgctgctctggaagacagcaacaagaag
atcggcgaagacgcgatccgcgaactgatggcggcagttgactcctacattccgacgcct
gagcgcccgattgaccagccgttcctgatgccaatcgaagacgtgttctcgatctctggc
cgtggtacggttgtgacgggtcgcgttgagcgtggtatcgtcaaggttggcgaagaagtc
gaaatcgtcggcatccgcgccacctcgaagacgaccgttaccggcgttgaaatgttccgc
aagctgctcgatcagggccaggctggcgacaacattggtgccctggttcgcggcgtacag
cgcgatggcgttgagcgtggccagatcctgtgcaagcccggttcggttaagccgcacaag
aagttcatggcagaagcctacatcctgacgaaggaagaaggcggccgtcatacaccgttc
ttcaccaactaccgtccgcagttctacttccgcacgacggacgttaccggtattgtttcc
ctgccggaaggcacggaaatggttatgcctggtgacaacgtcacggttcaggttgaactg
atcgttccgatcgccatggaagaaaagctgcgcttcgcgatccgcgaaggtggccgtacc
gtcggcgccggcatcgtcgcttcgatcatcgaataa

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