KEGG   Agrobacterium vitis: Avi_2887Help
Entry
Avi_2887          CDS       T00851                                 

Gene name
ddl
Definition
(GenBank) D-alanine:D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
avi  Agrobacterium vitis
Pathway
avi00473  D-Alanine metabolism
avi00550  Peptidoglycan biosynthesis
avi01100  Metabolic pathways
avi01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:avi00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    Avi_2887 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Avi_2887 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Avi_2887 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:avi01011]
    Avi_2887 (ddl)
Enzymes [BR:avi01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Avi_2887 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:avi01011]
 Precursor biosynthesis
  Amino acid ligase
   Avi_2887 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A ATP-grasp_3 CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: ACM37080
UniProt: B9JY50
LinkDB All DBs
Position
1:complement(2407062..2407964)
Genome map
AA seq 300 aa AA seqDB search
MLGGFSSERPVSLASGAPCASALEEHGYRVTRVDVTRDIASVLHDLKPDVVFNALHGPFG
EDGTIQGILEYLSIPYTHSGVLASALAMDKTQAKIVAAAAGIPVAFARQMSRFEIGNVHP
IEPPYVVKPVREGSSFGVVIVKEDQSHPPQILGSSEWRYGDTVMVESYVAGRELTCGVMD
GKALAVTEVIAKANTFYDYDSKYAAGGSTHVIPAQLSPKIYQKIQDLSVRAHNAIGCRGV
SRSDFRYDDRFSEDGDLIWLEVNTQPGMTPTSLVPEMAAHAGISFGEFVSWMVEDASCSR
NT seq 903 nt NT seq  +upstreamnt  +downstreamnt
ttgctgggaggattttcgtcggagcggcctgtcagcctcgcctctggcgccccttgcgca
tcggcgcttgaggagcacggctaccgcgtgacacgggtcgatgtcacccgcgatatcgcc
agcgtgcttcatgacttgaagcctgatgtggtcttcaatgctttgcatggtcctttcggc
gaagacggcaccattcagggtatccttgaatacctctccattccctatacgcattccggt
gtgctggcctcggcgcttgccatggacaagacgcaggcaaagatcgtggcggcggcggcg
ggcattcccgtggctttcgcccggcaaatgtcgcgctttgagatcggcaatgttcatccg
atcgagccgccttacgtcgtcaagccggttcgggaaggttccagtttcggcgtggtgatc
gtcaaggaagatcagtcgcatccgccgcagatccttggctcgtcggagtggcgctatggc
gataccgtcatggtcgaatcctatgtggctggccgcgaactgacatgcggtgtcatggat
ggcaaggcgctggctgtgaccgaggtgatcgccaaggccaatacattctacgattacgac
tccaaatacgcagcaggggggtcgactcacgtcattccggcgcaactttcaccgaaaatt
taccaaaaaatacaagacttgtctgtcagggcccataacgcgatcgggtgccgtggcgtc
agtcggtccgacttccgttacgacgaccgtttttctgaagatggcgacttgatctggctg
gaagtgaatacccagccgggcatgacgccaacctcgcttgtgcctgaaatggctgcgcat
gcgggcatttcctttggtgaattcgtcagctggatggtggaggatgcgtcgtgttcacgg
tga

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