Aeromonas veronii B565: B565_0725
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Entry
B565_0725 CDS
T01462
Name
(GenBank) RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
avr
Aeromonas veronii B565
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avr03021
]
B565_0725
Transcription machinery [BR:
avr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B565_0725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEB48760
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All DBs
Position
789489..790472
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AA seq
327 aa
AA seq
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MSQEQLVMQDAELEFDAEPESHEVEELQEVAAEADETISDELLAPELNKVMDATQLYLGE
IGFSPLLTAEEEVYYARRALRGDKAARKRMIESNLRLVVKIARRYNNRGLVLLDLIEEGN
LGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTARE
LSHRLDHEPTAEDIAFALDRSVDDVNRMLKLNEKITSVDTPIGGDRDKALLDVLSDERGM
GPELESQEDDMRSSIVHWLEELNPKQREVLARRFGLLGYEPATLEDVGAEIGLTRERVRQ
IQVEGLRRLREILLSQGLSIEALFRTN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaacaactggtaatgcaggatgcagagttagagtttgacgctgaacccgaa
tctcacgaggtagaagagttgcaggaggtagccgccgaggcggacgagactatctccgat
gagttgctggcacctgagctgaacaaggtgatggatgccacgcaactctatctgggggag
attggcttctccccgctgctcactgccgaagaggaagtctattacgcccgtcgtgccttg
cggggtgacaaagctgcccgcaagcgcatgatcgagtccaacctgcgactggtggtgaaa
atcgcccgtcgttacaacaaccgcggcctggtgctgctggatcttatcgaagagggcaac
ctcggtcttatccgtgcggtcgagaagttcgaccccgagcgcggcttccgtttctccacc
tatgccacctggtggatccgccagaccatcgagcgggccatcatgaaccagacccgcact
atccgtctgcccattcatgtggtcaaagagttaaacgtttacctgcgcaccgcgcgcgaa
ctctctcaccgtctcgatcatgaaccgaccgccgaggatatcgccttcgcgctggatcgt
tcggtggacgacgtgaaccgcatgctcaaactcaacgagaagatcacctcggtggacacc
cccatcggcggcgatcgcgacaaggcgctgctggatgtgctctccgacgagcgcggcatg
gggcctgagctggagtctcaggaagatgatatgcgcagcagcattgtgcactggctggaa
gagctcaatcccaagcagcgggaagtgctggcccgtcgtttcggtctgctgggttatgag
ccggccaccctcgaggatgtgggggccgagattggcctgacccgcgagcgggtgcgccag
atccaggtcgaggggctgcgccgtctgcgggagatcctgctgagccaggggctctccatc
gaggcgctatttcgtaccaattaa
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