Aeromonas veronii B565: B565_3168
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Entry
B565_3168 CDS
T01462
Name
(GenBank) Helix-turn-helix, AraC
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
avr
Aeromonas veronii B565
Pathway
avr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
avr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B565_3168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avr03000
]
B565_3168
03400 DNA repair and recombination proteins [BR:
avr03400
]
B565_3168
Enzymes [BR:
avr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B565_3168
Transcription factors [BR:
avr03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B565_3168
DNA repair and recombination proteins [BR:
avr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B565_3168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH_8
HHH
SOK
Motif
Other DBs
NCBI-ProteinID:
AEB51203
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Position
3574594..3576255
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AA seq
553 aa
AA seq
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MKEQKNLWPIFAIPVRFWLVTAPEPPYSFAIYSSKAANTMNAKPSPDSSQDEVINTLSRE
QCHAARLARDARFDGRFFTGVISTGIYCRPVCPARPPHEHNVRYFQSAAAAEQYGLRPCL
RCRPELAPAARGDLPVELARLLARIDRGELAEGTLAKLATEAGISERTLRRQFEQHLGAS
PKQVEQTRRLLLAKRLLTETGLPITDIAFAAGFASIRRFNDAWLNAYGLAPRSLRQQEQH
DDAPEHMSAQPRGATLTLQLPYRPPYDVAAMLAFYRLRAIPGLEQVDGEMYERCYRVGDQ
VARVRIAQGKGHSLQLTVHDLPLAALPDLLYRVRRMWDLDADMQRIGDLLGQDPLLARLQ
ARWPGVRLPGGWDEYEVMLRAIVGQQVSVKGAITILGRLVARTEAQFGVAQLPTPAQLCE
LDLDGIGMPGSRIRTLRGVAQALASGELPLTTASDEQLLALPGIGPWTVSYWRLRCGLDT
DAFPASDLVLQKALGGGTKLPVKEVLAQSAAWQPWRSYAASWLWHAMSEAPDLLLRATGN
EQQPDTQQQERTP
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagcaaaaaaacctttggccaatttttgctatccctgtccgtttctggctagtc
acggcccccgagcccccttactcttttgccatctattccagcaaagccgccaacaccatg
aatgcaaagccaagcccagattcgtcacaagatgaggtgatcaacaccctcagccgtgag
cagtgtcacgcagcacggctcgctcgcgacgctcgctttgatggccgcttctttaccggc
gttatctcgaccggcatctactgccgaccggtctgcccggcacgtccgccgcacgagcac
aatgtgcgctacttccaaagcgccgcggccgccgagcagtatgggctgcgaccctgcctg
cgctgccgccctgagctggcccccgccgcccgtggcgatctgccggttgaactggcacgt
ctgctggcacgcatcgatcgcggagagctggcggagggcacgctcgccaaactggccact
gaggcagggatcagcgaacgcaccctgcgccgccagttcgagcaacatctcggcgcctca
ccaaaacaggtggagcagacgcgccgcctgctgctcgcgaaacggctgctgactgaaacc
gggctgcccattaccgacatcgcgtttgccgccggctttgccagcatccgccgcttcaat
gacgcctggctgaacgcctacggactggccccgcgctccctgcgccaacaggagcagcac
gatgacgcgccagagcacatgagtgcgcagccgcgcggcgcaactctgacgctgcaactg
ccctaccgccccccatatgacgtggcggccatgctggcgttctatcggctccgggcgatc
cccgggctggagcaggtggatggtgagatgtatgagcggtgctaccgggtcggcgatcag
gtcgcgcgggtgcgtatcgcgcagggcaaggggcatagcctgcagctcaccgtgcatgac
ctgccgctcgccgcgctgcccgatctgctctatcgggtgcgtcggatgtgggatctcgat
gccgacatgcagcggatcggtgatctgctcggtcaggatccgctgctcgcccgcttgcag
gcgcgctggcccggcgttcggctgccgggtggctgggacgaatacgaggtgatgctgcgc
gccatcgtcggccagcaggtctcggtcaagggagccatcaccatactcgggcgactggtg
gcccgcaccgaggcgcaattcggggtggcgcaactaccgacccccgcccagttgtgcgaa
ctcgatctcgacggtatcggcatgcccggcagccgcattcgcaccctgcgcggagtggcg
caggcgctggccagtggcgagctgcccctcactacagccagtgacgagcagttgctggcg
ctgccgggcataggcccctggacggtctcttactggcggctgcgttgcgggctggatacc
gatgccttccccgcctccgatctggtactgcaaaaggcactcggaggcggcaccaagctg
ccggtgaaggaggtgttggcgcaaagcgcagcatggcagccatggcgcagctatgcggcc
agctggctgtggcacgccatgagtgaagcgcccgatttgctgctccgtgccaccggcaac
gaacaacagccagatacccaacaacaggagagaaccccatga
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