Avibacterium volantium: NCTC3438_02054
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Entry
NCTC3438_02054 CDS
T06626
Symbol
nrdD
Name
(GenBank) Anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
avt
Avibacterium volantium
Pathway
avt00230
Purine metabolism
avt00240
Pyrimidine metabolism
avt01100
Metabolic pathways
avt01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
avt00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NCTC3438_02054 (nrdD)
00240 Pyrimidine metabolism
NCTC3438_02054 (nrdD)
Enzymes [BR:
avt01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
NCTC3438_02054 (nrdD)
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_Tnp_IS91
2OG-FeII_Oxy_4
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
VEB25182
UniProt:
A0A3S4L0T2
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Position
1:2120967..2123093
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AA seq
708 aa
AA seq
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MSSFFVIKRDGSRAQFDIQRIINAIRKAALAVDIEQDDYWQKMGQQVANGIFAKYQQEID
IHDIQRLVENQLMASDYPQVARAYIEYRHDRDLAREKRSQLTREIEGLIEQSNVELLNEN
ANKDAKVIPTQRDLLAGIVAKHYAKRYILPRDVVEAHEKGEIHYHDLDYAPFFPMFNCML
VDLKGMLTQGFKMGNAEIEPPKSIGTATAVTAQIIAQVASHIYGGTTINRIDEVLAPYVQ
LSYEKHLKTAQQWNVPEPENYAKALIEKDCFDAFQSLEYEVNTLHTSNGQTPFVTFGFGL
GTSWQARLIQQAILRNRIRGLGKNHKTPVFPKLVFTIKKGVNQQASDPNYDIKQLALECA
SKRMYPDILNYEQVVKVTGSFKAPMGCRSFLGAYEQEGELQHDGRNNLGVVSLNLPRIAL
EAKGDEQRFYALLDERLAIAKKALMTRIARLENTKARVAPILYMEGACGVRLKADDNVAE
IFKNGRASISLGYIGIHETINALYPQHHIYDDEQLRQKGIAIVEYLAQATKQWRQETGYA
FSLYSTPSENLCDRFCRLDTKQFGVITGVTDKGYYTNSYHLDVEKKVNPYDKLDFEMPYP
PLANGGFICYGEYPNIQHNLKALEDVWDYSYDRVPYYGTNTPIDECYECGFTGEFHCTSK
GFTCPKCGNHDSEKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgttttttgtgattaaacgcgatggttcacgcgcacaatttgatattcagcgc
atcatcaatgctattcgtaaagcggcattggcggttgacattgagcaggacgattattgg
caaaaaatggggcaacaggttgccaatggcatttttgccaaatatcagcaggaaattgac
attcacgacattcagcggctggttgaaaatcaattaatggcgagtgattatccgcaagta
gcacgcgcttatattgaatatcgccacgatcgtgatttagcgcgggaaaagcgtagccag
cttacgcgtgaaattgaagggctgattgagcaaagcaacgtggaattgctcaatgaaaat
gccaacaaagacgcgaaagtgatcccaacgcagcgggatttactggcaggcattgtggcg
aaacattatgccaagcgttatattcttccgcgtgatgtggtggaagcccacgaaaaaggg
gaaattcactatcacgatttggactatgcgccattcttcccaatgtttaattgtatgttg
gtggatcttaaaggaatgctcacccaaggttttaaaatgggcaatgcagaaattgaaccg
ccgaaatccatcggtacggcaacggcggttaccgcacagattattgcccaagttgcgagc
catatttacggtggcacaaccattaatcgaattgatgaagtgcttgcgccctatgtgcaa
ctgagttatgaaaagcatttaaaaacagcccagcaatggaatgtacctgagcctgaaaat
tatgctaaggcgttgattgaaaaggattgttttgacgcattccaatcgttggaatatgaa
gtgaatacgcttcacacgtccaacgggcaaaccccttttgttacctttggttttggttta
ggcacgagctggcaagcacgtttaattcagcaagccattttacgcaaccgcattcgtggc
ttaggcaaaaatcacaaaacgcccgtcttcccgaaattggtctttaccattaaaaaaggc
gtaaaccaacaagctagcgatcctaattacgatatcaaacaactggcgttggaatgtgct
tctaaacgaatgtatcccgatattctcaattatgaacaagtggtcaaagtaacaggctct
ttcaaagccccaatgggctgccgcagttttttaggcgcgtatgaacaagagggtgaatta
cagcacgatggacgcaataaccttggcgtagttagcctgaatttaccgcgtatcgcgctt
gaagccaaaggtgatgagcaacgtttttacgccttacttgatgaacgccttgccatcgcg
aaaaaagccttaatgacgcgtattgctcgccttgaaaacaccaaagcacgggttgcccct
attttatatatggagggcgcgtgtggcgtgcgattgaaagctgatgacaatgtggcggag
atcttcaaaaatggacgagcttccatttcccttggctatattggcattcacgaaaccatt
aacgcgctttatccgcaacatcatatttatgatgatgaacaattgcgacaaaaaggcatt
gcgattgtggaatatttggcccaagctaccaaacaatggcgacaagaaactggctacgcg
tttagcctttattccaccccaagcgaaaatttatgcgaccgcttctgtcgtttagacacc
aaacaatttggagtgataactggcgtaaccgacaaaggctactacaccaacagctatcat
ttagatgtggagaaaaaggtcaatccttacgacaaactggattttgaaatgccttaccca
ccactggcgaacggcggatttatttgctacggtgaatatccaaatattcagcacaatctc
aaagccttagaagatgtttgggattacagctatgaccgcgtgccttactacggcaccaac
accccgattgatgaatgttatgaatgtggtttcacaggcgaatttcactgcaccagcaaa
ggcttcacctgccctaagtgcggtaaccacgacagcgaaaaagtttccgtcacccgccga
gtctgcggttatctaggcagcccagacgccagaccgtttaatgcaggaaagcaggaagag
gtgaaaagaagagtgaagcatttgtag
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