Aliivibrio wodanis: AWOD_I_0075
Help
Entry
AWOD_I_0075 CDS
T03808
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
awd
Aliivibrio wodanis
Pathway
awd03030
DNA replication
awd03410
Base excision repair
awd03420
Nucleotide excision repair
awd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
awd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWOD_I_0075 (polA)
03410 Base excision repair
AWOD_I_0075 (polA)
03420 Nucleotide excision repair
AWOD_I_0075 (polA)
03440 Homologous recombination
AWOD_I_0075 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
awd03032
]
AWOD_I_0075 (polA)
03400 DNA repair and recombination proteins [BR:
awd03400
]
AWOD_I_0075 (polA)
Enzymes [BR:
awd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWOD_I_0075 (polA)
DNA replication proteins [BR:
awd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AWOD_I_0075 (polA)
DNA repair and recombination proteins [BR:
awd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AWOD_I_0075 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AWOD_I_0075 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Sds3
Motif
Other DBs
NCBI-ProteinID:
CED70173
UniProt:
A0A090ILS3
LinkDB
All DBs
Position
1:87337..90141
Genome browser
AA seq
934 aa
AA seq
DB search
MARIPDNPFILVDGSSYLFRAYHAAPNFTNGDGQPTGAVYGVINMLRSLLKQFETDRIAV
IFDAKGKTFRNDMYPEYKANRPPMPDDLRCQIEPLHKLIKAMGLPLISISGVEADDVIGT
LASQASKAGIPVLISTGDKDMAQLVDENVTLINTMTNVIMGPEGVEEKFGVPPELIIDYL
ALMGDTSDNIPGVPGIGDKTARALLQGVGGLDALYANLDDIAPLGFRGSKGMAKKLEENR
EGAYLSYELATIKLDVELEQRPEELVKQEPNVDELVQMFGQMNFKRWLTEMLDGSDGKIV
SHETSANRIAGASSNSNDETEEEVIVAAQVDRSKYETILTKEAFLSWLEKLNSVEVAAFD
TETDSLDYMVANLIGLSFAIEEGEAAYVPVAHDYLDAPEQLDRDWVLEQLKPYLEDDNKA
KVGQNLKYDASVLARYDIEMKGIKFDTMLESYVYNSVAGKHNMDSLALRYLQHNTISFEE
IAGKGKKQLTFNQIALEQAAPYAAEDADITLRLHHVLNAKLEADEKLKSVFTDIELPLVS
VLSRMERKGVYIDDMLLSAQSLEIGQRLDELEKAAYEVAGQEFNMNSPKQLQVILFEKME
LPVIKKTPSGAASTNEEVLQELALEYELPKLILEYRGLAKLKSTYTDKLPKMINPSTGRV
HTSYHQAVTATGRLSSTDPNLQNIPIRNEEGRRIRQAFVAPHGWKILAVDYSQIELRIMA
HLSQDKALLEAFSAGKDIHSATAAEVKGVSIEEVTSEDRRRAKAINFGLIYGMSAFGLAK
QIGISRGEAQDYMNVYFERYPGVMQYMEETRLLATEQGYVETLYGRRLHLPEINARNAIR
RKAAERAAINAPMQGTAADIIKKAMILVDDWIEAEGNAQVNLLMQVHDELVFEVKEDVLE
EVTKQITALMEGAVELDVPLIADSDFGNNWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaattcctgataatccattcattctagtggatggctcttcgtatcttttccgt
gcataccacgccgctcctaattttactaatggcgatggccaaccaacaggtgcagtgtat
ggcgtaattaatatgctgcgtagtcttttaaaacaatttgaaacagatcgtatagcagtg
atctttgatgcaaaaggaaaaacctttcgtaatgacatgtacccagagtacaaagcgaat
cgtccaccaatgccggatgatttacgttgccagattgaacctctacacaaactgatcaaa
gcgatgggcttaccattgatctctatttcaggggtagaagccgatgatgtgattggtaca
ttagcatcgcaagcctcaaaagcaggcattcctgtactgattagtaccggtgataaagat
atggcgcagcttgttgatgagaacgtgactctaataaataccatgacaaatgtgatcatg
ggacctgaaggtgttgaagagaaattcggcgttccaccagagctgattattgattatctt
gcactgatgggtgatacctcagataacattccaggtgtcccaggtattggtgacaaaaca
gcaagagcactattacaaggtgttggtggtttagatgcgctttatgccaaccttgatgat
attgcgccattaggtttccgtggctcaaaaggcatggcgaaaaaactagaagagaataga
gaaggcgcttacctttcttatgaacttgcgaccattaagcttgatgttgaattagaacag
cgacctgaagagcttgtaaaacaagaaccaaatgttgatgagttagttcaaatgtttggt
caaatgaattttaaacgttggctaactgaaatgctagatggcagtgacggtaagatcgtt
tcacatgaaacatcagcaaatcgaatagcaggtgcatcatcaaatagtaatgatgagact
gaagaagaagtcattgttgctgctcaagttgatcgctcaaagtacgagactattttaacc
aaagaagctttcttatcatggttagaaaagttaaacagcgtagaagttgctgcttttgat
actgaaactgacagtttagattacatggttgctaatttgattggcttatcgtttgcaatc
gaagaaggcgaagctgcgtatgttcctgttgctcatgactatcttgatgcccctgagcaa
cttgatcgtgattgggttcttgagcaattaaaaccgtatttagaagacgacaacaaagca
aaagtgggccaaaacttaaaatacgatgcaagtgtattagcgcgttacgatatcgagatg
aaaggtattaagtttgataccatgcttgaatcttatgtgtataacagcgttgctggtaaa
cacaatatggatagcttagcactgcgttacttacagcataatacgatttcatttgaagag
attgcgggtaaaggtaaaaaacaacttacgtttaaccaaatcgctttagagcaagctgca
ccttacgccgctgaagatgcagacatcacattacgactacaccatgtattgaacgctaag
ctagaagcggatgagaaattaaaatcggtatttactgatattgaattaccacttgtttca
gtactttctcgtatggaaagaaagggtgtgtatattgatgacatgctgctttctgcgcaa
tcacttgaaattggccagcgtttagatgaattagaaaaagcagcgtatgaagtagcagga
caagaattcaatatgaattcaccaaagcagcttcaagttattctatttgaaaaaatggaa
ctgccagttattaaaaagacaccgtcaggagcagcatcaactaatgaagaagtgctgcaa
gagttggcgttagagtatgaacttcctaagctgattttagagtaccgtggcttagctaag
ctaaaatccacttataccgataaacttccaaagatgattaatccatcaacgggtcgtgtg
catacctcttaccatcaagcggtgacagcgacaggacgtttatcatcgaccgatccaaat
ttacaaaatattccaattcgtaatgaagaaggtcgtcgtattcgccaagcgtttgttgct
ccccatggttggaaaatcctagcagtcgattattctcaaattgaattgcgtatcatggcg
cacttatctcaagataaagcgttattagaagcgttctcggcaggtaaagacattcactca
gcaaccgctgcagaagtgaagggcgtatcgatagaagaggtgacctctgaagatcgtcgc
cgtgctaaggccatcaactttggtttgatctatggcatgagtgcatttggtcttgcgaag
caaattggtatctctcgtggtgaagcacaagattacatgaatgtgtattttgagcgttac
cctggtgtaatgcaatacatggaagaaactcgactattagcaactgagcaaggttatgtg
gaaactctatacgggcgtcgtctgcatttacctgaaatcaatgctcgtaatgctatacgt
cgtaaagcagcagaacgtgcggctattaatgcgccaatgcaaggcacagccgcagacatt
atcaagaaagcgatgatcttagtcgatgactggatagaagcggaaggtaatgctcaagtt
aatctacttatgcaagtacacgatgaattggtatttgaagttaaagaagatgtattagaa
gaagtgaccaaacaaattacagcactaatggaaggagcggtagagctcgatgtaccactt
attgcagatagtgattttggtaataactgggatgaagctcattaa
DBGET
integrated database retrieval system