Acetobacterium woodii: Awo_c18190
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Entry
Awo_c18190 CDS
T01732
Symbol
pcrA4
Name
(GenBank) ATP-dependent DNA helicase PcrA4
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
awo
Acetobacterium woodii
Pathway
awo03420
Nucleotide excision repair
awo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
awo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Awo_c18190 (pcrA4)
03430 Mismatch repair
Awo_c18190 (pcrA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
awo03400
]
Awo_c18190 (pcrA4)
Enzymes [BR:
awo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Awo_c18190 (pcrA4)
DNA repair and recombination proteins [BR:
awo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Awo_c18190 (pcrA4)
MMR (mismatch excision repair)
Other MMR factors
Awo_c18190 (pcrA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
Viral_helicase1
UvrD-helicase
PhoH
AAA_19
UvrD_C_2
SLFN-g3_helicase
DEAD
AAA_14
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AFA48599
UniProt:
H6LIM5
LinkDB
All DBs
Position
2153213..2155366
Genome browser
AA seq
717 aa
AA seq
DB search
MNKNNTDWSIEEARLTETIAEATLQLDEALNANEKNRAMILETKKEIRENTSHSMGNLWG
SDGFEALVELSQSMNPVHERMAIYEFTEAQISKLRGILDIPYFARIDFCFNEGDHIEQIY
IGRHSLKKGNTYKLLIHDWRSPVASVFYRFAPGDAWYDAPVGRIEGKLLIKRQFEIKNGH
LDYFFDADLQVFDDLLRKLLSKNTSLKMKTIVESIQRDQDLVIRDIENDLLIVQGVAGSG
KTSIALHRAAYLMYQDLSDNLLGREILILSPHKLFEEYISNVIPELSDDNVRTVIFDEIL
KDLIERKFETRNIFLERVLLNNPQSQLKMESMAFKGSADFIKIIDRFIDEIPERFMKIRD
ITFKGETILTRTEIINRLQINPDTPLKTKLGYLQEAISEAVYGKWRVPIKKSLRQEMMRF
AEIDTFMLYQQLFENKGYFLKISTGIELPGNIDKILTLTKRNLSHQTLNYDDAVAMGYLS
LRLFGAREYTTIKQVIIDEGQDYYPLHYEILKRMFLKSKFTILGDINQTLQKNEDLSFYE
QITKRLNRKKNALVTMNKSYRCTSEILHFSKNFIDDSIAVENYNRHGEEPVMLSAPNLNC
LVDILCKEINQCLKAGYQSIGLILKTQKNTKVIFDALKLKMPVNLIRHDTMVAIEGVSIM
PVYLSKGLEFDAVFICDASQVNYSTVADQRLLYISCTRALHRLLLLCEGEPTSLLKI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaataacaccgattggtctattgaagaagcaagattaacagaaaccattgcc
gaggcgacgcttcagctcgatgaggcactcaatgccaatgaaaaaaaccgggcgatgatt
ctggagaccaaaaaagaaatccgtgaaaacacgtctcactccatgggtaatctctggggc
tctgatggctttgaagcactggttgaattgagtcaatcgatgaatccggtgcacgaacgc
atggcaatttatgaatttaccgaagcccaaatctcaaagctgcggggaattcttgatatc
ccctattttgcgcgcattgatttttgcttcaacgagggtgatcatatcgaacaaatttac
attggccgtcattcgcttaaaaagggaaacacttataagttactgatccatgactggcgt
tcgcctgttgccagcgtgttctaccgttttgcgcccggcgatgcctggtatgatgctccg
gttggccgaattgagggcaagcttttaataaaacgacaatttgaaatcaagaatggtcat
ctggattatttttttgatgccgatctgcaggtgttcgatgatttattgcgcaaactttta
tcaaaaaatacctcgcttaaaatgaaaacaatcgtcgaatcgattcaacgggatcaggac
ctcgtcatccgggatatcgaaaatgaccttttgattgtccagggggtagcggggagcggt
aaaacttccattgcgttacaccgggcggcctatctgatgtatcaagatttgtcagacaat
ttgctgggccgcgaaattttaattctttcgccacataaactttttgaggaatacatttcc
aatgtgattcccgagctgagcgacgacaatgtccgaactgtcatctttgatgaaattctc
aaagatttgatcgaacggaaatttgaaaccagaaacatttttctggaaagagttttatta
aataatccccagagccaactaaaaatggaaagtatggcctttaaaggttcggcagatttc
atcaaaatcattgatcgtttcattgatgagatccctgagcgcttcatgaagatccgcgac
atcacgtttaaaggagaaacgattttgacccgcaccgaaataatcaatcgcctccaaatc
aatccagatacaccactaaaaacgaaactgggttatctgcaagaagcgattagtgaagca
gtttacggcaaatggcgggtgccgatcaaaaaatcgctccgtcaagaaatgatgcgattc
gccgaaatcgataccttcatgctttatcagcaactttttgagaataagggttatttttta
aaaatttccaccggtatcgagttacctggcaacattgataaaatactgacgcttaccaaa
agaaatttgagccaccagacattgaactatgatgatgccgttgctatgggatatttaagc
ctgcgcttatttggggccagggaatatacaaccatcaaacaggtcatcattgatgaaggc
caggattattatccgctccactatgaaatccttaagcggatgtttttaaaatcgaaattt
accattcttggggatatcaaccagacccttcaaaaaaatgaagatctcagcttttatgaa
cagattacgaagcgcttgaaccgtaaaaaaaatgcccttgtcacgatgaacaaaagttat
cgctgtaccagtgagattttgcattttagtaaaaatttcattgatgattcaatcgcggta
gagaactataatcgccatggggaagagccggtgatgttatcggcccctaatctcaattgc
ctggttgacatactttgtaaagaaatcaaccagtgtttaaaagccggatatcaatcgatt
ggactgattctaaaaactcagaaaaataccaaggtgatttttgatgccttaaagctaaaa
atgcccgttaatctgattcgccatgatacgatggtggcgattgaaggggtttcgatcatg
cccgtctatctgtctaaaggcctggagtttgatgccgtatttatctgcgatgccagtcag
gttaattatagcactgtggctgaccagcggcttctttacatcagctgcacccgggctctg
catcgcctgttactactatgcgaaggcgagccaacttcgttgcttaaaatttag
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