Achromobacter xylosoxidans NH44784-1996: NH44784_055831
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Entry
NH44784_055831 CDS
T02785
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
axo
Achromobacter xylosoxidans NH44784-1996
Pathway
axo03420
Nucleotide excision repair
axo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
axo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NH44784_055831
03430 Mismatch repair
NH44784_055831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
axo03400
]
NH44784_055831
Enzymes [BR:
axo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NH44784_055831
DNA repair and recombination proteins [BR:
axo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NH44784_055831
MMR (mismatch excision repair)
Other MMR factors
NH44784_055831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
T7SS_EccA1_N
Motif
Other DBs
NCBI-ProteinID:
CCH09525
LinkDB
All DBs
Position
complement(5987439..5989730)
Genome browser
AA seq
763 aa
AA seq
DB search
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASPFGLLAVTFTN
KAAREMLARMSAILPIDTRGLWIGTFHGLCNRMLRAHHRDAGLPQTFQILDVTDQLAAIK
RLMKANGVDDEKYPPRDVQRFINGAKEEGLRPADVEAYDAHRRRLIEIYQLYEAQCQREG
VVDFAELLLRAYELLSRNAPVREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGGGAAIFA
VGDDDQSIYAFRGANVGNMSDFERDYAHGTVIRLEQNYRSYGHILDSANALIGHNSGRLG
KNLWTDQGEGEPVRVIEQPSDGMEAQWIVDEIRSLIHEGSLRREIAVLYRSNAQSRVIEH
AIFSAGIPYKVYGGLRFFERQEIKHALAYLRLMANPHDDTSWMRVVNFPTRGIGARTLEQ
LADAARAHDSSLYAAVALVAGKGGSNLAQFAQLIHRLIEETRDLPLPEMVEHMLEASGLN
AHYKAEREGAERLENLNELITAAAVFASEENYDGMPAGVVPEQASSSTLMPGVVDAAPVV
SDGLTPLAAFLSHAALEAGDNQAQQGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHEN
SILEQSGLEEERRLMYVAITRARQRLYISLAQSRMLHGQTRYAMRSRFLDEIPEQHLKWL
SPKAGLAPALSAGGGWNGNRGDAFGRKPTNTIAPRQPRGTASGVTVGDKQYRVGQGVHHA
RFGDGTIVSLSGAGQDAQAEIHFRDVGSKTLALGIAKLDIVQG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgatgctagagaaactcaatcctgaacaacgcgccgcagtaacgttagaaccgcagcac
gccctggtcctggccggggcgggcagcggcaagacccgggtgctcaccacccgcatggcc
tggctgattcaaaccggccaggcctcgccttttgggctgctggcggtcacgttcaccaac
aaggccgcccgcgaaatgctggcgcgcatgtcggccatcctgccgatcgatacgcgcggc
ctctggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatcatcgcgac
gccggcctgccgcagaccttccagatcctcgacgtcaccgaccagctcgccgccatcaag
cggctgatgaaggccaacggcgtcgacgacgaaaaatacccgccgcgcgacgtgcagcgc
ttcatcaacggcgccaaggaagagggcctgcgccccgccgacgtcgaagcctatgacgcg
catcgccgccgcctgatcgagatctaccagctctacgaagcccagtgccagcgcgaaggc
gtggtcgacttcgccgagctgctgctgcgcgcctacgaactgctgtcgcgcaacgcgccg
gtgcgcgagcactaccaacgccgtttccgccacatcctggtcgacgagttccaggacacc
aacacgctgcagtacaagtggctgcggctgctggccggcggcggcgcggcgatcttcgcc
gtgggcgacgacgaccagtcgatctacgcgttccgcggcgccaacgtcggcaacatgtcc
gacttcgagcgcgactacgcgcacggcaccgtcatccgcctggagcagaactaccgctcg
tacggccacatcctggattcggccaacgcgctcatcggccacaacagcggccgcctgggc
aagaacctctggaccgaccagggcgaaggcgaaccggtgcgcgtcatcgagcagccctcg
gacggcatggaagcgcaatggatcgtcgacgagatccgctcgctgatccacgaaggcagc
ctgcggcgcgagatcgccgtgctctaccgcagcaacgcgcagtcgcgcgtgatcgagcac
gccatcttctcggccggcataccctacaaggtgtatggcggcctgcgcttcttcgagcgc
caggaaatcaagcacgcgctcgcctacctgcgtctgatggccaatccgcacgacgacacc
tcgtggatgcgggtagtgaatttccccacgcgcggaatcggcgcgcgcacactggaacag
ctggccgacgcggcccgcgcgcacgattccagcctgtacgcggccgtggcgctggtggcc
ggcaagggcggctccaacctggcccagttcgcccagctgatccatcgcctgatcgaggaa
acgcgcgacctgccgctgcccgaaatggtcgagcacatgctcgaggccagcggcctgaac
gcgcactacaaggccgagcgcgaaggcgccgagcgcctcgaaaacctgaacgaactgatc
accgccgcggcggtgttcgcgtccgaggagaactacgacggcatgcccgccggcgtggtg
cccgagcaggcctcctccagcacgctgatgcccggggtggtcgacgcggcgccggtggtg
tccgacggcctgacgccgctggcggccttcctgtcgcacgccgcgctcgaggccggcgac
aaccaggcccagcagggccaggacgccgtgcagctcatgaccgtgcacgcggccaagggc
ctggagttcgacgccgtcttcatcaccggcctcgaggaaggcctgttcccgcacgagaac
agcatcctggagcaatccggcctggaagaagaacgccgcctcatgtacgtggcgatcacc
cgcgcgcgccagcgcctgtacatcagcctggcgcaaagccgcatgctgcatggccagacg
cgctacgccatgcgttcgcgctttctcgacgaaattcccgagcagcacctcaagtggctg
tcgcccaaggccggcctggcgccggcgctcagcgccggcggcggctggaacggcaaccgc
ggcgacgccttcggccgcaagcccaccaacaccattgcgccgcgtcaaccgcgcggcacg
gcctccggcgtcaccgtcggcgacaagcagtatcgtgtagggcagggcgtgcaccacgcc
cgtttcggtgacggcaccatcgtcagcctgagcggcgcggggcaggacgcccaggcggag
atccatttccgcgatgtcgggtccaagacgctggcgctgggcatcgccaagctggatatc
gttcaaggttga
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