KEGG   Achromobacter xylosoxidans A8: AXYL_05139Help
Entry
AXYL_05139        CDS       T01341                                 

Gene name
dacB
Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
axy  Achromobacter xylosoxidans A8
Pathway
axy00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:axy00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AXYL_05139 (dacB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases [BR:axy01002]
    AXYL_05139 (dacB)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:axy01011]
    AXYL_05139 (dacB)
Enzymes [BR:axy01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     AXYL_05139 (dacB)
   3.4.21  Serine endopeptidases
    3.4.21.-  
     AXYL_05139 (dacB)
Peptidases [BR:axy01002]
 Serine Peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   AXYL_05139 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:axy01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   AXYL_05139 (dacB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2 SAM_MT
Motif
Other DBs
NCBI-ProteinID: ADP18445
UniProt: E3HRG7
LinkDB All DBs
Position
complement(5509270..5510694)
Genome map
AA seq 474 aa AA seqDB search
MGGLKRWLAGGLLAAVAGVAGAQVPGLPPNVVNAWKASKLPDSSLSLVVQEVGGPRLVAL
NAKESRNPASVMKLVTTWAALSELGPNYVWRTEFMTAPGARPDAKGVLSGPLYLRAGGDP
QFLLQDLWVLLRELRLRGVKQINDLVIDRSIFGQVATDPGAFDGAPDRAYNASPDALMVG
FGALRLLFTPDPAANKWVPLIDPPLPGLKIEGRVEWSDARCPGAPVVTTEPLITQQGVTI
RVNGKVAGSCGEFSLYRLALSQPDYATEVFRMLWKELGGTFKGQVRSGMVPPDAVVLASH
DSPTLAEAIRQINKRSNNVMARTLLLTLGAERGRRPATVSSSETVAKELLARQGLDMPEL
VIDNGAGLSRDARVSADSLASMLTVAWNSPVMPEYISSFAIAGVDGTVRRRLKGDGTAGM
AHLKTGSLRDVRSIAGYVLGASGKRYVVVSIVNHEQAGAVRAFDDALIAWLTEQ
NT seq 1425 nt NT seq  +upstreamnt  +downstreamnt
atgggcgggctgaagcgatggctggccggcgggctgctggccgcggtggcgggggtggcc
ggggcgcaggttcccggcttgccgcccaacgtggtgaacgcctggaaggccagcaagctg
cctgacagctccctgtccctggtggtgcaggaggtgggcgggccgcggctggtggcgttg
aacgccaaggagtcgcgcaatcccgcctcggtgatgaagctggtcacgacctgggccgcg
ctgtccgaactggggcccaactacgtctggcgcaccgagttcatgacggcgcccggcgcg
cggcccgacgccaagggcgtgctgagcggcccgctgtacctgcgggcagggggcgatccg
caattcctgttgcaggacctgtgggtgctgctgcgcgaattgcgcctgcgcggcgtcaag
cagatcaatgacctggtcatcgaccgcagcatcttcggccaggtcgcgaccgaccccggc
gccttcgacggcgctccggaccgggcctataacgccagcccggacgccttgatggtgggc
tttggcgcgctgcggctgctgttcacgccggaccccgccgccaacaaatgggtgccgctg
atcgatccgccgctgccgggcctgaagatcgagggccgcgtcgaatggagcgacgcccgt
tgcccgggcgcgccggtggtgaccaccgaaccgttgatcacccagcagggcgtgaccatc
cgcgtgaacggcaaggtggccggctcctgcggcgaattcagcctgtaccgcctggcgctg
tcgcagcccgactacgccaccgaggtgttccgcatgctctggaaggagctgggaggcacc
ttcaagggccaggtccgttccggcatggtgccgcccgacgcggtggtgctggcctcgcat
gattcgcccacgctggccgaggcgatccgccagatcaacaagcgcagcaacaacgtcatg
gcgcgcaccttgctgctgaccctgggcgccgagcgcggccggcggcctgccaccgtctcc
agcagcgaaaccgtggccaaggaactgctggccaggcagggcctggacatgcccgaactg
gtcatcgacaacggcgccggcctgtcgcgcgatgcgcgggtgtcggccgacagcctggcg
tcgatgctgaccgtggcctggaactcgcccgtcatgccggagtacatctcctctttcgcg
atcgccggcgtggacggcacggtgcgccgccgcctgaagggcgatggcacggcgggcatg
gcccacctgaagaccggctcgctgcgcgacgtgcgctccatcgcgggctatgtgctgggc
gccagcggcaagcgctacgtggtggtcagcatcgtcaaccacgaacaggcgggcgccgtg
cgcgccttcgacgacgccctgatcgcctggcttaccgaacaataa

DBGET integrated database retrieval system