Azoarcus sp. KH32C: AZKH_0003
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Entry
AZKH_0003 CDS
T02502
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
aza
Azoarcus sp. KH32C
Brite
KEGG Orthology (KO) [BR:
aza00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aza03032
]
AZKH_0003 (gyrB)
03400 DNA repair and recombination proteins [BR:
aza03400
]
AZKH_0003 (gyrB)
Enzymes [BR:
aza01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AZKH_0003 (gyrB)
DNA replication proteins [BR:
aza03032
]
Prokaryotic type
DNA Topoisomerases
AZKH_0003 (gyrB)
DNA repair and recombination proteins [BR:
aza03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZKH_0003 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BAL22355
UniProt:
H0PYC3
LinkDB
All DBs
Position
3060..5570
Genome browser
AA seq
836 aa
AA seq
DB search
MSEPQNLPQSAPVPAAGSGAYDESSIQQLEGLEAVRKRPGMYIGDTSDGTGLHHMVFEVV
DNSIDEALAGHCDDIVITIHPDNSISVSDNGRGIPVGVKMDDKHEPKRSAAEIVMCVLHA
GGKFNQNSYKVSGGLHGVGVSCVNALSKWLRLTVRRDGKKHFMEFHRGVPQDRVIDVVDG
IEVSPLKVLGETSKRGTEVHYLADEEIFGTIEYHYDILAKRLRELSFLNNGVKIRLIDQR
FGKEEDFAFAGGVKGFVEYINRTKSVLHPTVFYAEGTTRIPTGHGHDAELGVEVAMQWND
SYAEQVLCYTNNIPQADGGTHLTGLRAAMTRVINKYIEEHEIAKKAKVDITGDDMREGLA
CVLSVKMPDPKFASQTKMKLVSSEARPAVEEVVANKLTDFLQENPIDAKTICAKIVEAAR
ARDAARKAREMTRRKGLLDGVGLPGKLADCQEKDPALCEIYLVEGDSAGGSAKQGRDRKF
QAILPLKGKILNVEKARFDKLLQSQEIATMITALGTGIGKEDYKPEKLRYHRIIIMTDAD
VDGAHIRTLLLTFFYRQMPELVERGHIYIAQPPLYKIKHGKTELYIKDDNELNQHMLKLA
LDGATLIPREGAAPIGDETLGGLARSYLLAEAVINRLAGYIDPAVLHAMLAHDIEVSLDD
EAAANASIERIQPHLPDDVRLRAEYHDETETWQLAIERMHHGNRKLGWLDDPFVRSGDYR
SIRTASAAIADLMGPGATIRRGEKSQAVTRFAEAIRWLLNEVERGLTKQRYKGLGEMNPE
QLWETTMDPVVRRLLRVQIDDAIAADEIFTTLMGDDVEPRRAFIEGNALYARNIDV
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccgcaaaacctgcctcagtccgcccctgtccccgccgccggctccggcgcc
tacgacgaatcgagcatccagcagctcgaaggtctggaagccgtgcgcaagcgtcccggc
atgtacatcggcgacacctccgacggcaccggcctgcaccacatggtgttcgaggtcgtc
gacaactcgatcgacgaggcgctggccggccactgcgacgacatcgtcatcaccatccac
cccgacaactcgatctccgtgtccgacaacggccgcggcatcccggtcggcgtgaagatg
gacgacaagcacgagcccaagcgctcggccgctgaaatcgtgatgtgcgtgctgcacgcc
ggcggcaagttcaaccagaacagctacaaggtgtccggcggcctgcacggcgtcggcgtc
tcgtgcgtgaacgcgctatcgaagtggctgcgcctgacggtgcgccgcgacggcaagaag
cacttcatggagttccaccgcggcgtgccgcaggatcgcgtgatcgacgtcgtcgacggc
atcgaggtgagcccgctgaaggtcctcggcgagacgagcaagcgcggcaccgaggtgcat
tacctcgccgacgaggaaatcttcggcaccatcgaataccactacgacatcctcgcaaag
cgcctgcgcgagctttcgttcctcaacaacggcgtcaagatccgcctcatcgaccagcgc
ttcggcaaggaggaggacttcgccttcgccggcggcgtgaagggcttcgtcgaatacatc
aaccgcaccaagagcgtgctgcatccgaccgtgttctacgccgaaggcaccacgcgcatc
ccgaccggccacggccacgacgccgagctgggcgtcgaggtcgcgatgcagtggaacgac
agctacgccgaacaggtgctgtgctacaccaacaacatcccgcaggccgacggcggcacc
cacctcacggggctgcgcgctgcgatgacgcgggtcatcaacaagtacatcgaagaacac
gagatcgccaagaaggctaaggtcgacatcaccggcgacgacatgcgcgaaggcctcgcc
tgcgtgttgtcggtgaagatgcctgacccgaagttcgcgagccagaccaagatgaagctg
gtctccagcgaagcgcgccccgccgtcgaggaagtcgtcgccaacaagctcaccgacttc
ctgcaggaaaacccgatcgacgcgaagaccatctgcgcgaagatcgtcgaagccgcccgc
gcccgcgacgccgcccgcaaggcgcgcgagatgacgcgccgcaagggcctgctcgacggc
gttggcctgcccggcaagctcgccgactgccaggagaaggatcccgcgctgtgcgaaatc
tacctcgtcgagggtgactccgcaggcggctccgccaagcagggccgcgaccgcaagttc
caggcgatcctgccgctgaagggcaagatcctcaacgtcgagaaggcgcgcttcgacaag
ctgctgcagagccaggaaatcgcgacgatgatcaccgcgctcggcaccggcatcggcaag
gaagactacaagccggaaaaactgcgctaccaccgcatcatcatcatgaccgacgcggac
gtcgacggcgcccacatccgcacgctgctgctgaccttcttctaccgtcagatgcccgag
ctcgtcgagcgcggccacatctacatcgcccagccgccgctctacaagatcaagcacggc
aagaccgagctctacatcaaggacgacaacgagctcaaccagcacatgctgaagctcgcc
ctcgacggcgcgacgctgatcccgcgcgaaggcgccgccccgatcggcgacgaaaccctc
ggcggcctcgcgcgcagctacctgctcgccgaagccgtcatcaaccgcctcgccggctac
atcgatcccgccgtgttgcacgcaatgctcgcccacgacatcgaggtcagcctcgacgac
gaagccgccgccaacgcgagcatcgaacgcatccagccgcatctccccgacgacgtgcgc
ctgcgcgccgaataccacgacgaaacggaaacctggcagctcgcgatcgagcgcatgcac
cacggcaaccgcaagctcggctggctcgacgaccccttcgtccgctccggcgattaccgc
agcatccgcaccgcgagtgccgccatcgccgacctgatgggccccggcgccaccatccgc
cgcggcgaaaagagccaggccgtcacccgcttcgccgaagccatccgctggctactcaac
gaagtcgaacgcggcctgaccaagcagcgctataagggtctcggcgagatgaaccccgag
cagctgtgggaaaccacgatggaccccgttgtgcgtcggctactgagggtgcagatcgat
gacgcgattgctgcggatgagatctttacgacgttgatgggggatgacgtcgagccacgg
cgggcgtttattgaggggaatgcgttgtatgcgaggaatattgacgtttga
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