Azorhizobium caulinodans: AZC_3064
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Entry
AZC_3064 CDS
T00609
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
azc
Azorhizobium caulinodans
Pathway
azc00540
Lipopolysaccharide biosynthesis
azc01100
Metabolic pathways
azc01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
azc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AZC_3064
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
azc01005
]
AZC_3064
Enzymes [BR:
azc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
AZC_3064
Lipopolysaccharide biosynthesis proteins [BR:
azc01005
]
Lipid A
AZC_3064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAF89062
RhizoBase:
AZC_3064
UniProt:
A8IBG0
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Position
complement(3502952..3503809)
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AA seq
285 aa
AA seq
DB search
MSATAVEPQSVVEAGKVRIGNSLPLALIAGPCQMESRDHALETAAALKEITDRLGIGLIY
KTSFDKANRTSVNAARGMGLEKALPVFAEIGERFGLPTLTDVHEIHQCAPVGEVVDVLQI
PAFLCRQTDLLVAAARTGRVVNVKKGQFLAPWDMVNVVAKLTQSGNGRVLLTERGASFGY
NTLVSDMRGLPVMAQTGAPVVFDATHSVQQPGGKGASSGGQREFVPVLARAAVAVGVAAV
FIETHPDPDHAPSDGPNMVPLKDLESLVALLQEIDRVAKAHPVAI
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgaccgccgttgagccccagtccgtggtggaggcgggcaaggtccgcatcggc
aacagcctgccgctcgccctcatcgccggcccctgccagatggagagccgcgaccacgcg
ctggaaaccgccgccgcgctgaaggagatcaccgatcgcctcggcatcggcctcatctac
aagacctccttcgacaaggcgaaccgtacctcggtcaatgccgcgcgcggcatgggcctt
gagaaggcgttgccggtgtttgccgagatcggcgagcgcttcggcctgccgacgctgacc
gacgtgcacgagatccaccagtgcgcccccgtgggcgaggtggtggacgtgctccagatc
ccggccttcctctgccgccagaccgaccttctcgtcgcggcggccaggaccggccgggtg
gtgaatgtgaagaagggccagttccttgcgccctgggacatggtcaatgtggtggccaag
ctcacccagtccggcaacgggcgcgtgctgctcaccgagcgcggcgcctccttcggctac
aacacgctggtttccgacatgcgcggcctgccggtgatggcgcaaaccggcgcgccggtg
gtgttcgacgccacccattccgtgcagcagccgggcggcaagggcgcctcctccggcggg
cagcgcgagttcgtgccggtgcttgcccgcgccgcggtggcggtgggcgtggcggcggtc
ttcatcgagacccatcccgacccggatcatgccccctccgacggccccaacatggtgccg
ctgaaggatctggagtcgctggtggcgctgttgcaggagatcgaccgcgtggccaaggcg
catccggtggcgatctga
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