KEGG   Azoarcus sp. DN11: CDA09_01235
Entry
CDA09_01235       CDS       T05691                                 

Definition
(GenBank) ethanolamine utilization protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
azd  Azoarcus sp. DN11
Pathway
azd03030  DNA replication
azd03430  Mismatch repair
azd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:azd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CDA09_01235
   03430 Mismatch repair
    CDA09_01235
   03440 Homologous recombination
    CDA09_01235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:azd03032]
    CDA09_01235
   03400 DNA repair and recombination proteins [BR:azd03400]
    CDA09_01235
Enzymes [BR:azd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CDA09_01235
DNA replication proteins [BR:azd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CDA09_01235
DNA repair and recombination proteins [BR:azd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CDA09_01235
SSDB
Motif
Pfam: RNase_T GIY-YIG Nucleic_acid_bd
Other DBs
NCBI-ProteinID: AYH42017
UniProt: A0A3Q8HQX3
LinkDB
Position
278243..279646
AA seq 467 aa
MSLPDSLVLIDVETTGANPLRDRVTEIAVLRIERGELVDRWETLVNPECPIPPLIQRLVG
ITDAMVAGAPTFAALADEVRARLGGAVFVAHNARFDYGFIRSEFARIEQTFDAPVLCTVK
LSRALYPEHHRHGLDALIERHGFTCGARHRAMGDTEVLWQFARLVTDSFAPDVLARAVER
AMKRPARAVELPEGVLEGLPESPGLYYLYGDNDQLLYIGRSPCLRARVMEHFAPGVKGKD
AELAKRVRRVDWEESAGELTATLREMELLHRRCPPYNRVAGSADVFGLQYVPGRKRPPIL
QRVALAGSDPAAWGDVHGTFRTKKEADNLLRELAQAYQLCLRRLGLESGNSGPCSAHLAK
RCAGVCAGKESFAAHDERLLGALGAVRLRPWPWPGAVMIAERCPHSGSEAWHVVDRWCLL
GTADSPLALDALRAALPPRRFDLDIYRTLVRWLAADGHRDAVTPLLS
NT seq 1404 nt   +upstreamnt  +downstreamnt
gtgtcgctgcctgactcactggtcctgatcgacgtcgaaaccaccggcgcgaatccgttg
cgcgaccgcgtgacggagattgccgtgctgcgcatcgagcgcggcgagctggtcgatcgc
tgggaaacgctggtcaatcccgaatgcccgatcccgccgctgatccagcggctggtcggc
atcaccgacgcgatggtcgccggtgcgccgactttcgcggcgctcgccgacgaggtgcgt
gcccggctgggcggcgcggtgttcgtcgcgcacaacgcgcgcttcgactacggcttcatc
cgcagcgagtttgcgcgcatcgagcagactttcgacgccccggtgctgtgcaccgtgaag
ttgtcgcgcgcgctgtatcccgagcatcaccgccacggcctcgacgcgctgatcgagcgc
cacggcttcacctgcggcgcccgccaccgtgcgatgggcgacaccgaggtgctgtggcag
tttgcccgcctcgtcaccgactcgttcgcgcccgacgtgctcgcgcgcgcggtcgagcgc
gcgatgaagcgcccggcgcgcgcggtcgagctgcccgagggcgtgctcgaaggcctcccc
gagtcgcccggcctgtactacctgtacggcgacaacgaccagctcctctacatcggccgc
agcccctgcctgcgcgcgcgcgtgatggaacacttcgcgcccggcgtgaagggcaaggac
gcggaactcgccaagcgcgtgcgccgcgtcgactgggaggaaagcgccggcgagctgacg
gcgacgctgcgcgagatggaactgttgcaccggcgctgcccgccgtacaaccgcgtcgcg
ggcagcgcggacgtcttcggcctgcagtacgtgccggggcgcaagcgtccccccatcctg
cagcgtgtcgcgctggcgggcagcgatccggcggcgtggggcgacgtgcacggcacgttc
cgcaccaagaaggaagccgacaacctgctgcgcgaactggcgcaggcctatcagctatgc
ttgcgccgcctcgggctggagtcgggcaacagcggcccgtgctcggcgcacctcgcgaag
cgctgcgccggcgtgtgtgccggcaaggaaagcttcgcggcgcacgacgagcgcctgctc
ggcgcactcggggccgtgcggctgcgcccctggccgtggccgggcgcggtgatgatcgcg
gaacgctgtccccacagcggcagcgaggcctggcacgtggtcgaccgctggtgcctgctc
ggcaccgccgacagtcccctggcgctggacgcgttgcgcgcggcgctgccgccgcgccgc
ttcgatctcgacatctaccgcacgctggtgcgctggctggccgcggacggtcaccgcgac
gccgtcacgccgctcctgtcctga

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