Azospirillum ramasamyi: DM194_06880
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Entry
DM194_06880 CDS
T05500
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
azm
Azospirillum ramasamyi
Brite
KEGG Orthology (KO) [BR:
azm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
azm03032
]
DM194_06880 (topA)
03400 DNA repair and recombination proteins [BR:
azm03400
]
DM194_06880 (topA)
Enzymes [BR:
azm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DM194_06880 (topA)
DNA replication proteins [BR:
azm03032
]
Prokaryotic type
DNA Topoisomerases
DM194_06880 (topA)
DNA repair and recombination proteins [BR:
azm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DM194_06880 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AWU94009
UniProt:
A0A2U9S8N8
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All DBs
Position
1485576..1488374
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AA seq
932 aa
AA seq
DB search
MPGSNVVIVESPAKAKTINKYLGDDYTVIASFGHVRDLPARDGSVRPDEDFAMEWELGDR
SKRHIDEIAKAVKSADRVYLATDPDREGEAIAWHLSELLREKHLTDNRDVQRITFNEITK
SAVQAAIANPRDVSRELVDAYLARRALDYLVGFTLSPVLWRKLPGSKSAGRVQSVALRLI
CERESEIEVFKPQEYWSIAVGFTTPAGSSFTASLTQLDGKRLDKFGLPNREAAEAAVAKI
RPQAFTVSTVERKQSRRNPSPPFTTSTLQQEASRKLGFGATRTMRTAQRLYEGVDIGGET
VGLITYMRTDGVSLSQEAIDGARSLIGSQYGERYVPAQPRVYKTAAKNAQEAHEAIRPTD
LQRRPDTVSAYLEGDELRLYELIWKRTLASQMESAVLDQVAVDIASPSKDVVLRATGSIV
VFDGFLKVYQEDRDDAAEDDQQERRLPAMDQGDALDRGDINPEQHFTQPPPRYSEASLVK
KLEELGIGRPSTYASILQVLQDRNYVRLDKRRFIPEDRGRLVTAFLENFFHRYVEYNFTA
ELENQLDEISDGKIDWKTVLRDFWTAFDAAVNGTKDLTITQVLTTLDNELGAHFFPAATA
DGHDPRVCPVCREGRLGLKLGKMGAFIGCSRYPDCRYTRPLAVANDENGEAQDGPRELGN
DPETGLPVTVRRGPFGAYIQLGPAPAAAAPPEEPPAEEPAVDGKKPKAKKKKKDDTPKPK
RVSLPKGMAAADVDLDTALKLLALPRAIGNHPETGEEISAGIGRFGPYLKHGSVYKSLTP
DDDVLTIGINRAVDLLAGAAKKASAPAKTLGDHPKTGKPITMGSGRFGPYVKHGSVYASI
PKGTEPDSVTLEQALELIEAKVAKDAAKKGKAPKEAEPAKAEGAEAEKPAKAKTAAKTAA
KKPAAKKATKAKAAKDAPAEDAAPKKKTAKAS
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
ttgccgggcagcaacgtcgtcatcgtcgaatcgccggccaaggcgaagaccatcaacaag
tatctgggtgatgactacaccgtcatcgccagcttcggccatgtccgcgaccttccggcg
cgggacggttcggtgcgcccggatgaagacttcgcgatggaatgggagctgggcgaccgc
tcaaagcgccacatcgacgagatcgccaaggctgtgaagtcggccgaccgcgtctatctc
gcaaccgacccggatcgcgagggggaagccatcgcctggcacctgtcagaactgctgcgc
gaaaagcacctgaccgacaaccgcgacgtccagcgcatcaccttcaacgagatcaccaag
agcgcggtgcaggccgccatcgccaacccgcgcgatgtgtcccgcgaactggtcgacgcc
tatctggcgcgccgggcgctggactatctggtcggcttcaccctgtcgccggtgctgtgg
cgcaagctgccgggctccaagtcggccggccgcgtgcagtcggtggcgctgcgcctgatc
tgcgagcgcgagtcggagatcgaggtcttcaagccgcaggaatactggtcgatcgcggtg
ggcttcaccacgccggccggctcctccttcaccgcgtcgctgacccagctggacggcaag
cggctcgacaagttcggcctgcccaaccgcgaggcggccgaagccgccgtggcgaagatc
cgcccgcaggccttcaccgtctcgacggtggagcgcaagcagagccgccgcaacccgtcg
ccgcccttcaccacctccaccctgcagcaggaggcctcgcgcaagctgggcttcggcgcc
acccgcaccatgcgcacggcgcagcggctgtatgagggcgtggacatcggcggcgagacg
gtcggcctcatcacctatatgcgaaccgacggcgtcagcctgtcgcaggaggccatcgac
ggcgcccgcagcctgatcggcagccagtatggcgagcgctacgtcccggcccagccgcgg
gtctacaagaccgccgccaagaacgcccaggaggcccacgaggccatccggccgaccgac
ctgcagcgccggccggatacggtctccgcctatctggaaggcgacgagctgcggctctat
gagctgatctggaagcgtacgctggcgagccagatggaaagcgccgtgctggatcaggtg
gcggtggacatcgccagcccgtcgaaggacgtggttctgcgcgccaccggctccatcgtc
gtgttcgacggcttcctgaaggtctaccaggaagaccgcgacgacgcggccgaggacgac
cagcaggagcgccgcctgcccgccatggaccagggcgacgccctcgaccgcggcgacatc
aacccggaacagcatttcacccagccgccgccgcgctattccgaagccagcctcgtcaag
aagctggaggagctggggatcggccggccgtcgacctatgcgtcgatcctccaggttctg
caggaccgcaattacgtccggctggacaagcggcgcttcatcccggaggaccgcggccgg
ctggtgaccgcattcctggagaacttcttccaccgctatgtggagtacaacttcacggcg
gagctggagaaccagctggacgagatctccgacggcaagatcgactggaagaccgtcctg
cgcgatttctggaccgccttcgacgcggcggtgaacggcaccaaggatctgacgatcacc
caggtgctgaccacgctcgacaacgagttgggcgcccatttcttccccgccgccaccgcc
gacggccatgacccgcgcgtctgcccggtctgccgcgagggccggctggggctgaagctg
ggcaagatgggcgccttcatcggctgctcgcgctatcccgactgccgctacacccggccg
ctggccgtcgccaacgacgagaacggcgaggcgcaggacggcccgcgcgagttgggcaac
gacccggagaccggtctgccggtgacggtgcgccgcggccccttcggcgcctacatccag
ctgggcccggcgccggccgccgccgccccgccggaggagccgcccgccgaggagcccgcc
gtcgacggcaagaagccgaaggcgaagaaaaagaagaaggacgacacgccgaagcccaag
cgggtgtcgctgcccaagggcatggccgcggccgacgtcgatctcgacaccgcgctgaaa
ctgctggccctgccccgcgccatcggcaaccacccggaaaccggcgaggagatcagcgcc
ggcatcggccgcttcggtccctacctgaagcatggcagcgtctacaagtcgctgacgccc
gatgacgacgtgctgaccatcggcatcaaccgcgccgtcgatctgctggccggcgcggcc
aagaaggcgtcggccccggccaagaccctgggcgaccatccgaagaccggcaagccgatc
accatgggctccggccgcttcggtccctatgtgaagcatggcagcgtctatgcctcgatc
ccgaagggcacagagccggacagcgtcacgctggaacaggcgctggaactgatcgaggcc
aaggtcgccaaggacgccgccaagaagggcaaggccccgaaggaggccgagcccgccaag
gccgagggcgcggaggcggagaagcccgccaaggcgaaaaccgcggcaaagaccgcggcg
aagaagcccgctgccaagaaggcgaccaaggccaaggccgccaaggacgctccggcggag
gacgccgcgccgaagaagaagaccgccaaggcatcgtga
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