Azospirillum thermophilum: DEW08_14195
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Entry
DEW08_14195 CDS
T05917
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
azz
Azospirillum thermophilum
Pathway
azz03410
Base excision repair
azz03430
Mismatch repair
azz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
azz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DEW08_14195 (recJ)
03430 Mismatch repair
DEW08_14195 (recJ)
03440 Homologous recombination
DEW08_14195 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
azz03400
]
DEW08_14195 (recJ)
DNA repair and recombination proteins [BR:
azz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DEW08_14195 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DEW08_14195 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DEW08_14195 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Peripla_BP_6
CbiG_mid
Motif
Other DBs
NCBI-ProteinID:
AWK87216
UniProt:
A0A2S2CRV7
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Position
2:complement(1684123..1685922)
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AA seq
599 aa
AA seq
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MTDTAPAFLNITRSLSGKRWQARPYDERMAWALAQGRGLPEIVGRVLAARGVTEEACDDF
LDPKLKALLPDPSRFKDMDKAAARIAAAILEGEPVAVFGDYDVDGATSAAVLRRFFRAAG
ADLRVYVPDRVKEGYGPNGPALLRLKAEGVRLVVTVDCGISAFAALETAAGAGLDVVVLD
HHAAEPRLPPAVALVNPNRLDEDGAYRTLCAAGVTFLAVVAINRALRQAGYYRERPEPNL
MEWLDLVALGTVCDVVPLTGLNRALVAQGLKVMARRCNPGLAALADVAGVKDKPDAYHAG
YVLGPRVNAGGRVGASDLGARLLSTDDPLEAMDLAQKLEAHNAERRAVEQGVLDDAIARL
EALSDREAELVFIAGEGWHPGVIGIVASRLKERYSRPACVVALEEGADGTVVGKASGRSV
RGVDLGAAVIAARQEGLLIAGGGHRMAAGFTVAGARLGELREFLTGRVREQVEAAPLVPM
LQLDGALSVGAATPALVETLGRLGPFGTGNSEPRFALADARVVRADVVGANHVRCFLQGN
DGARLKAIAFRALDSALGQALLTGRGTPFHVAGTLRIDRWNGSESVQLLIDDAAPAQSH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccgctcccgccttcctgaacatcacccgatcgctgtccggcaagcgctgg
caggcccggccctatgacgagcggatggcctgggcgctggcgcaggggcgcggcctgccc
gagatcgtcgggcgtgtgctggccgcccgcggcgtgacggaggaagcctgcgacgacttc
ctcgatcccaagctgaaggcgctgctgcccgacccgtcgcgcttcaaggacatggacaag
gccgccgcccgcatcgccgccgccatcctggagggggagccggtcgcggtcttcggcgac
tacgacgtggacggcgccacctcggccgcggtcctgcgccgtttcttccgggcggccggc
gccgatctccgcgtctatgtgcccgaccgcgtgaaggagggctacggccccaacggtccg
gccctgctgcggctgaaggccgagggcgtgcggctggtggtgacggtcgattgcggcatc
tccgccttcgcggcgctggagacggcggccggggccgggctcgacgtcgtggtgctcgac
catcatgcggcggagccacggctgccgcccgccgtggcgctggtcaaccccaaccggctg
gacgaggacggcgcctaccgcacgctctgcgccgccggggtgaccttcctagcggtggtc
gcgatcaaccgggcgctgcggcaggccggctattaccgcgagcggcccgaaccgaacctg
atggagtggctggacctcgtggcgctgggcacggtgtgcgacgtcgtcccgctgaccggg
ctgaaccgcgcgctggtggcgcaggggctgaaggtgatggcccggcgttgcaatcccggc
ctcgccgccctggcggacgtcgccggggtgaaggacaagcccgatgcctatcacgccggc
tacgtgctgggaccacgggtgaatgccggcgggcgggtgggggcctccgacctcggcgcc
cgcctgctttcgaccgacgacccgctggaggcgatggacctcgcccagaagctcgaagcc
cacaatgccgagcgccgcgcggtggagcagggggtgctggacgacgccatcgcccggctg
gaagccctgtcggaccgcgaggccgagctggtcttcatcgccggcgagggctggcatccc
ggcgtcatcggcatcgtcgccagccggctgaaggagcgctacagccgcccggcctgcgtc
gtggcgctggaggagggggcggacggcaccgtcgtcggcaaggcctccggccgctcggtc
cgcggcgtcgacctgggggccgcggtgatcgcggcgcggcaggaggggctgttgatcgcc
ggcggcggccaccgcatggcggcgggcttcaccgtggcgggggccagactgggcgagctg
cgcgagttcctgaccggccgcgtgcgcgagcaggtggaggccgcgccgctggtgccgatg
ctgcagctcgacggcgccctgtccgtcggtgcggcgaccccggcgctggtcgagacgctg
ggcaggctcggtcccttcggcaccggcaactcggagccgcgcttcgccctggccgatgcg
cgggtggtgcgggccgacgtggtgggggcgaatcacgtgcgctgcttcctgcagggcaac
gacggggcgcggctgaaggccatcgccttccgtgccctcgacagtgcgctgggccaggcg
ttgctgaccggccgcggcaccccgttccacgtcgccggcaccctgcgcatcgaccgctgg
aacggcagcgagtccgtccagctgctgatcgacgacgccgcgccggcccagtcgcactga
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