Brucella abortus 63 75: DK49_592
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Entry
DK49_592 CDS
T03461
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
babt
Brucella abortus 63 75
Pathway
babt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
babt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DK49_592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
babt03019
]
DK49_592
Messenger RNA biogenesis [BR:
babt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DK49_592
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Ortholog
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GFIT
Motif
Pfam:
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
AIJ80268
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Position
1:581454..583130
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AA seq
558 aa
AA seq
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MARSNTTEFVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFIAGLLEAKRQSEDSAPE
IPITIYKAGETFEVGPFKIEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGEAGVLALICDSTNALREGESPSERQVDESLRELIQNARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKAILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQIAQVRD
GDMLRLAPGKAEIIDEAPVGRLYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
MLDEPDLVAFGLPEEDRQGELMEDILLDAAIEAIDSIPRVRRKDIETVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtccaatactacggaattcgtctttctgccgctcggcggtgtaggcgaaatc
ggcatgaatttggccatgtatggttttggtcctgcggataaccgcgaatggctggtcgtg
gatatgggggtcagctttgccgggccggaacagccgggcgccgacctcattctgccggat
attcgctatctcgaagctgaaaagcacaatctgcgcggcattgtcatcacccatgcgcat
gaagatcattttggtgcgctgcttgatctttggccgcgcctgaaagttcccgtctatgcg
acgccgttcatagctggtctgctggaagccaagcgccagtcggaagacagtgcgccggaa
attccgatcacgatctataaggccggcgagacgtttgaagtcggcccgttcaagattgaa
gccgtcgctgtcacccattcgattccggagccggtttcgctggccatcaccacgccgctt
ggcacggtggtgcatacgggcgactggaaaatggatcccgagccatcgcttggccccgtc
attgacgaagcgcgctttcgcgccataggtgaggccggtgttctggcgctgatctgcgac
tctaccaatgcgctgcgtgaaggtgagtccccatcggagcgccaggtggatgaaagtctg
cgcgaactgatccagaatgcgcgcggacgtgtggcgatcacaactttttcctccaatgtg
gggcgtatccgttcgatcacggaagctgcccgcgatgcgggccggcaggttctggtggtg
gggcgttcgatgaagcgcgccatctcggttgcaaccgaacttggttatatggaaggcctg
ccggaatatctcagcgaagaggattacggctacattccgcgtgaaaatgtggtgatgatc
ctgaccggcagtcagggcgaaccgcgcgcggcactggcgaaacttgcccgcgatgagatg
cgcagcctcgccctgacggcgggtgatacggtcatctattcgtcgcgggccattcccggc
aacgaaaaggccattctcgacatcaagaaccggctgatcgatcgcggtatcaagatcatt
ggcgatgaggacgccctcgttcacgtttcaggccatccgcgccgcagtgagttgcgccgc
atgtattcctgggttcgtccgcagattctcgtgccggtgcatggcgaggccgctcatctg
gtcgcgcaagggtctctgggtgcgatggagggcatcgagcagatcgcacaggtgcgtgac
ggcgacatgctgcgccttgcgcccggcaaggccgagatcattgacgaagcgccagtgggc
cgcctctacaaggacggcaagctgatcggcgacgaagaagaaatcggtatggtggagcgg
cgcaagctcgcctatgtcggccatgtcgcggtatcggttctgctcgaccgggagcacaag
atgctggacgaacctgaccttgtggccttcggcctgcctgaggaggacaggcagggtgaa
ctgatggaagacattctgctggatgcagccattgaggcgatcgacagcataccgcgcgtt
cgccgcaaggatattgagacggtgcgcgagtctgttcgccgcgccgtccgggctgcggca
aatgaagcctggggcaaaaagccggtagtgaccgtcttcgtgaataggatacggtaa
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