Burkholderia ambifaria MC40-6: BamMC406_0958
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Entry
BamMC406_0958 CDS
T00684
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bac
Burkholderia ambifaria MC40-6
Brite
KEGG Orthology (KO) [BR:
bac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bac03019
]
BamMC406_0958
03009 Ribosome biogenesis [BR:
bac03009
]
BamMC406_0958
Messenger RNA biogenesis [BR:
bac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BamMC406_0958
Ribosome biogenesis [BR:
bac03009
]
Eukaryotic type
Pre-60S particles
RNases
BamMC406_0958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ACB63449
UniProt:
B1YV66
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All DBs
Position
1:1048793..1049413
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AA seq
206 aa
AA seq
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MTDTAASASQPALVRNELNLVWLDMEMTGLDPDNDRIIEIAVVVTNSTLDIAVEGPVFAI
HQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCGNS
ICQDRRFMARWMPEFERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYRQHFLIPAASAPAGESAPAA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgccgcttccgccagccagcccgcgctcgtgcgcaacgagttgaacctc
gtctggctcgacatggagatgacgggcctcgacccggataacgaccgcatcatcgaaatc
gcggtcgtcgtgaccaattccaccctcgacatcgcggtggaaggccccgtgttcgcgatc
caccagagcgacgaaacgctcgcgaagatggacgactggaacaagtcgacgcacggccgt
tcggggctgatcgaccgcgtgcgcgcgtcgaccgtgaccgaggcggacgccgccgcgcag
ctgcaggcgttcctcgcgcagtacgtgtcgcccggcaagtcgccgatgtgcggcaactcg
atctgccaggatcgccgtttcatggcgcgctggatgccggaattcgagcggttcttccac
taccgcaacctggacgtcagcacgctcaaggagctgtgccgccgctggcagcccgcgatc
tacaagggttttcagaagcgcgcgatgcacacggcgctcgccgacatccacgagtcgatc
gacgagctgaagtactaccgccagcatttcctgattccggccgcgtcggcgccggcaggc
gagtccgcgccggccgcctga
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