Bacillus sp. Y1: DOE78_00030
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Entry
DOE78_00030 CDS
T05922
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
bacq
Bacillus sp. Y1
Brite
KEGG Orthology (KO) [BR:
bacq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bacq03032
]
DOE78_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
bacq03400
]
DOE78_00030 (gyrB)
Enzymes [BR:
bacq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DOE78_00030 (gyrB)
DNA replication proteins [BR:
bacq03032
]
Prokaryotic type
DNA Topoisomerases
DOE78_00030 (gyrB)
DNA repair and recombination proteins [BR:
bacq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DOE78_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AYA78354
UniProt:
A0A385NW72
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Position
4226..6148
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AA seq
640 aa
AA seq
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MEQKEVQEQSYDENQIQVLEGLEAVRKRPGMYIGSTSVKGLHHLVWEIVDNSIDEALAGF
CTEINVVIEKDNSITVIDNGRGIPVGIHEKMGRPAVEVIMTVLHAGGKFGGGGYKVSGGL
HGVGASVVNALSTILEVYVHREGKIHYQKFERGVPVADLEVIGETDHTGTTIHFVPDGEI
FTETLEYDYETLANRIRELAFLNKGLKITIEDKREENKGNQYYYEGGIKSYVEHLNRSKE
VLHEEPIFIEGEKEGITIEVAIQYNDSYTSNIYSFANNIHTHEGGTHESGFKTALTRIIN
DYARKYGQIKENDSNLSGDDVREGLTAIVSIKHPDPQFEGQTKTKLGNSEVRAATDTIFA
EALDKFLLENPTVARKIVEKGLMAARARLAAKKARELTRRKSALEVSSLPGKLADCSSKD
PEISEIYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDKILSNNEVRAMITAI
GTGIGEDFDLSKARYHKVVIMTDADVDGAHIRTLILTFFYRYMRQILEAGYIYIAQPPLY
KVQQGKRIEYAYNDKELDRIFAELPSQPKPNIQRYKGLGEMNPDQLWETTMNPETRTMLQ
VSLQDAIEADETFEMLMGDKVEPRRNFIEANAQYVKNLDI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaaagaagtccaagaacaatcatatgatgaaaatcagatacaggttctggaa
ggtcttgaagccgtaagaaaaagaccggggatgtatattggttccacaagtgtcaaagga
ctccaccatttagtttgggaaatcgttgacaatagtattgacgaagctttagctggcttc
tgtacagagataaatgtggtaattgaaaaggataatagcattacagttattgataatgga
cgcggaattccagtcggtatccatgaaaagatgggaagaccggctgttgaagttattatg
actgtccttcatgccggaggaaagtttggtggcggaggttacaaagtttctggaggactt
cacggagtaggtgcgtctgtagttaatgcgctatccacgatattagaagtgtatgttcac
cgtgaagggaaaattcactaccagaaatttgagcgtggagtacctgttgctgacctagaa
gtgatcggagaaacagaccatacaggtacgacgattcactttgtcccagatggtgaaatt
ttcactgagactcttgagtatgattatgagacccttgccaatcgtatccgtgagcttgcc
tttttaaacaaaggattaaaaataacgattgaagataagcgtgaagaaaataaaggcaac
caatattactatgaaggcggtataaagtcttatgtagagcacttaaatagatcaaaggaa
gttctacatgaagagccaatctttattgaaggcgaaaaagagggaattaccatcgaggtc
gccattcagtacaatgatagttatacaagtaatatttactcgtttgcgaacaatattcat
acccatgaaggtgggacgcatgaatctggttttaaaacagctcttacgagaatcataaac
gactacgcgagaaaatatggtcagataaaagaaaacgattcgaatctgtctggtgatgat
gtacgagaaggtttaacagctatcgtatcaattaaacatccagatccacagtttgaaggt
caaacaaaaacgaagcttggtaactcagaggtaagagcagcaacagatacgatttttgcc
gaggcactggataagtttcttcttgaaaaccctacagttgctaggaaaatagttgaaaaa
ggcttaatggcggcaagagcccgtttagctgccaaaaaagcaagagagttaacacgtcga
aagagtgcccttgaggtatcgagcttacctggtaagcttgctgactgctcttccaaagat
cctgaaataagtgagatatatatcgttgagggagactcagcgggtgggtcagcaaaacaa
ggccgtgaccgtcatttccaagcgattcttccacttagagggaaaatcctgaacgtagaa
aaagcaagattggataaaatcctttcaaataatgaagttcgtgccatgattacagcaatt
ggaacagggattggcgaagactttgatctttcgaaagctcgttaccataaagttgtaatt
atgacggatgcagatgttgacggtgcgcatattcgaacactgattctaacattcttctat
cgatatatgagacaaatcttagaggctggctatatttatatcgctcagccaccgttatac
aaagttcaacaagggaaacgcattgaatatgcctataacgataaagaattagaccgtatt
ttcgcagagcttccgagtcaaccgaaacctaatattcaacgttacaaaggattaggtgag
atgaatcctgatcagctttgggaaacaaccatgaacccagagactagaacaatgttacag
gttagtcttcaagatgccattgaagccgatgaaacattcgaaatgctaatgggagataaa
gtggagccacgtcgtaactttatcgaagcaaatgcacaatacgtgaaaaacttagatatt
taa
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