Bifidobacterium actinocoloniiforme: AB656_05175
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Entry
AB656_05175 CDS
T04036
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bact
Bifidobacterium actinocoloniiforme
Pathway
bact03030
DNA replication
bact03430
Mismatch repair
bact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB656_05175
03430 Mismatch repair
AB656_05175
03440 Homologous recombination
AB656_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bact03032
]
AB656_05175
03400 DNA repair and recombination proteins [BR:
bact03400
]
AB656_05175
Enzymes [BR:
bact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB656_05175
DNA replication proteins [BR:
bact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB656_05175
DNA repair and recombination proteins [BR:
bact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB656_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
AAA_14
Rad17
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKV55680
UniProt:
A0A086Z2B5
LinkDB
All DBs
Position
complement(1243330..1245954)
Genome browser
AA seq
874 aa
AA seq
DB search
MALALYRRYRPDTFDGVIGQKQVTVPLSRALDAGKLTHAYLFSGPRGCGKTSSARIFARG
VNCVKGPTSHPCGECDSCRDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPVRDR
YKIFILDEAHMVTQQGFNALLKIVEEPPEHVMFIFATTEPEKVISTIRSRTHHYPFRLVP
QEVMEPYLESICEDEKIEAEPGVLKLAMRAGGGSVRDTLSVLDQLMVGADQGEITYDAAV
TLLGYTPESLIGEAIDAVIEGDGPKLYGVVQHVVIGGFEPKRFVEDLLQRVRDLLVLTLA
GAKAEGVLSEDAGVEGTGDMERQAKALGMGRLTRIADIIDDALASMSGAISPRMRLELLA
ARLLVPDSELAPTAASDGRAGTSMVGAPAGAGFIGAKRQNPSAPRGDGRQEQAPGPSPVA
QGPTQSGAPRPAPQVQAQPSGHADQSVDQRWDALVAALPDGVKEYVVREKVPRVALRRNP
KGRLVLALTFDQPLSQHAFALAVAARAVDGETKVPNIVMVRARQEFGPDTMIAPSGVAAN
GEKVESVARMSPERRSEVKKRIALARTNMSAMNLGVGVAPHTASEAAGQPHARGQQHSSQ
GSAQEGESAGDASDSDAHHASGPGSDAGRNASGSEPVDQGAGPSGGPIQGSSPLSAAGFA
STESYVRPDELDDDDPWATPSSPTVDLGPHGGADGSQSQDQEEAEAERKARKMGLPDLSD
QDDPWASHLASNPASVQTQAPDQTPVLRQDSAQAAEASAETSRVVDHPTPIEDAPQSAPV
EAPAAPVADTPASPGPDGDHGSFVPPDRPQSDPQVPPDEDEYSLNDARQGEESLMGPKEL
AKMFDVKKVEDLSADDPKNPLNINKRKRQQGFEQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggcactagcactgtatcgccggtatcgcccggacacctttgacggggtaatcggccag
aagcaggtcaccgtccccctttcccgcgccttggatgcgggaaagctgacccacgcctac
ttgttctccgggccccgggggtgcggtaagacctccagtgcccgcatcttcgcccgcggc
gtcaactgcgtcaagggacccaccagccatccgtgcggcgagtgcgatagctgccgggac
ctggcgaccggcggtccaggctccatcgacgtggtggagatcgacgcggccagccacaac
ggggtagatgacgcgcgcgaactgcgtgagagggccggattcgccccggtgcgcgaccgc
tacaagattttcatcctcgatgaggcccacatggtcactcagcaaggattcaacgccctg
ctcaagatcgtggaggagccccccgagcatgtgatgttcatcttcgccaccaccgagccg
gagaaggtcatctcgaccatccgctcccgcacccaccactaccccttccgcctggtgccc
caagaggtcatggagccgtatctggagagcatttgcgaggatgagaagatcgaagccgag
cctggcgtgctcaagttggccatgcgggccgggggcggttcggtgcgcgacaccctctct
gtactcgaccagctgatggtgggcgccgaccagggcgaaatcacctacgacgcggccgtg
acgctcctggggtacacgcccgagagtctgatcggtgaggccatcgacgctgtcatcgag
ggggacggtcccaagctctatggggttgtacagcatgttgtgattggtgggttcgagccc
aagcgcttcgttgaggacctcctgcaacgggtgcgcgaccttctggtcctgaccttggct
ggggccaaggccgaaggcgtgctgagcgaggatgcgggcgtcgagggaaccggcgacatg
gagcggcaggccaaggccctcggcatgggcaggctcacacggatagccgacatcatcgac
gacgcgttggcttcgatgtctggggcaatttcgccacgtatgaggttggagctgctggcg
gcccgcctcttggtgccggactcggagctggcgcctaccgcggctagtgatgggcgggcg
ggcacttccatggttggggctcctgctggcgctggcttcatcggggcgaaacggcagaac
ccatctgcgcctcggggcgatggcaggcaagagcaagcgcctgggccaagtccggtggcc
caggggccgacgcaatccggcgcaccgcggcccgcgccccaggttcaggcgcagccctcc
ggccacgcggatcagagcgttgaccagcgctgggacgctctagtagcggccctgcctgat
ggcgtcaaggaatacgtggttcgggagaaagtgccccgggtggccctgcgtcgaaatccg
aaagggcgcttggtcctggcattgaccttcgaccagccgttgagccagcacgctttcgct
ctggccgtcgccgcacgagcggtggacggtgagaccaaggtgcccaacatcgtgatggtc
cgggcccgccaggagtttggccccgacacgatgatcgccccgtcgggcgtggccgcaaac
ggtgagaaggtggagtcggtggccaggatgagccccgagcgccgctctgaagtgaagaag
cggatagccctggcccggaccaacatgtccgcgatgaacctgggcgtcggcgtcgctccc
cacacagctagtgaggccgccgggcagccccatgccagaggccagcagcactcaagccag
ggttccgcgcaggaaggggagtccgctggagacgcctccgactccgacgctcaccacgcc
agtggtccgggttcggacgctggccgtaatgcgtcgggcagcgagccggtagatcagggt
gcaggcccttccggcggccccatccaggggtcgtcgcccttgtctgccgctggtttcgct
tcgaccgagtcgtatgtcaggccggacgagctggatgatgatgacccgtgggccacccct
tcgtcacccaccgtggatttagggcctcacggcggtgctgacgggtcgcagagccaagac
caagaggaggctgaggccgagcgcaaggcccgcaagatgggcttgcccgacctcagcgac
caggacgatccctgggccagtcacttagcatcgaaccctgcctcagtccagacccaagcc
ccggatcagaccccggtcctaaggcaagactcagctcaagcagcggaggcctcggccgag
acgtcgagggtcgtcgaccatccaacgcctatcgaggacgcgccgcagtcagcgccggtc
gaggcgcccgccgcgcccgtggcggacacccctgcctcgccgggccccgacggcgatcac
gggagcttcgtgccgccggatcgtccccagtccgacccgcaggtgcctcctgacgaggat
gagtattccctcaatgacgccaggcagggcgaggaatcgctgatggggccgaaagagctg
gccaagatgttcgatgttaaaaaagtggaggatttgagcgcagacgatccaaagaaccct
ctgaacattaacaaacgcaagcggcagcaaggatttgagcagtaa
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