Balaenoptera acutorostrata scammoni (minke whale): 103000086
Help
Entry
103000086 CDS
T03086
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
103000086 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
103000086
NCBI-ProteinID:
XP_007180018
UniProt:
A0A383ZY20
LinkDB
All DBs
Position
Un
AA seq
1546 aa
AA seq
DB search
MMTHSPASSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGGPGSLASVRGLQS
RSMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGL
FQPATSGRDANFLEEERLLQEYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTG
LKKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAH
IDFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCEL
LLYSRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNK
ETCARILLYRGANKDVKNNSGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAAR
RRGPPGVGLTVPPALLRANSDTSMALPDWMVFAAPGTSSAGAPGPTSGPQGQSQPSAPST
KLSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPRDGPAGGTGGSGGPGG
SLGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSVGEGGFWEGQVKGR
IGWFPSDCLEEVANRSQEAKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSIYIV
KEXXVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEALHKKAPPQAKRLPP
PTISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GATEDERPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
APFNPGSALPPPLEFSNSFEKPDSPLTPGPPHPLPDPPTPTSPAPPAPPPAVPAAPPTLD
STASSLTSYDSEVATLTQAGPAAAGDAPPPGPAAPAAPPPPAPQPGPDPPAGTDSGIEEV
DSRSSSDHPLETISSASTLSSLSAEGGAGGGVASVASGPELLDTYVAYLDGQAFGGSGPP
GPPYPPQLMTPSKLRGRALGASGGLRPGPGGGLRDPVTPTSPTVSVTGAGTDGLLALSAC
SGPSTAGVAGGPGAVEPEGPPVPLPSASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASAL
ATGKGSIISELSSKLQQFGGSSAAGGALPWARGGGGGSGDGHHGGASYVPERTSSLQRQS
PVASLFQNWSKPPLPPLPTGTGVSASAAAAPGATSPSASSSSTSARHLQGVEFEMRPPLL
RRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDMRGSPTGGAGGSADPFAPVFV
PPHPGMSGGLGGALSGASRSLSPTRLLSLPPDKPFSAKPLGFWTKFDVADWLEWLGLAEH
RARFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgatgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgt
cccgaggggggctcagaatccgacagctccccagacgggccagggagaggcccccggggg
acccggggccggggcagcgggggacctggtagcctggcctcggttcgaggcctccagagc
cgctccatgtctgtcccagacgacgcccacttcagcatgatggtgtttaggattggcatc
cctgacctgcaccaaacaaaatgcctgcgcttcaacccagatgccaccatctggacagcc
aagcagcaggtgctctgcgccctgagtgagagcctgcaggatgtcctcaactacggcctg
ttccagccggccacctcgggccgcgacgccaacttcctggaggaggagcggctgctgcag
gagtacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccga
gtttacaaacagaccaacctggatgagaagcagctggccaagttgcacacgaagacgggg
ttgaagaagtttctggagtacgtgcagctcgggacatccgataaggtggcacggctgctg
gacaaggggctggaccccaattatcatgactcggattcaggagagacccccctgacgctg
gctgcccagacagaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccac
atcgacttccgggcccgggatggcatgacagcgctacacaaggccgcgtgtgcccgtcac
tgcctcgctctcacggcgctcctggatcttgggggttcccccaactacaaggaccgccgg
ggcctgactcctctgttccacacggctatggtggggggcgacccccgctgctgtgagctg
cttctatacagcagggcccagctgggcatagctgacgagaacggctggcaggagatccac
caggcctgccagaggggccattctcagcacctggaacacctgctcttctatggggctgag
cctggagcccagaacgcctcggggaacacggccctgcacatctgcgccctctacaataag
gagacatgtgctaggatcctcctctatcgaggggccaacaaggacgtgaagaataacagc
ggacagacccccttccaggtggcagtgattgctgggaattttgaacttggggagctgatc
cgaaaccatcgagaacaggacgtggtgcccttccaggagtcccccaagtacgcagcccgg
cgacggggaccccccggagtggggctgacggtgccccccgcgctgctgcgggccaacagt
gataccagcatggccctgcctgattggatggtgttcgccgccccggggacctcgtccgcc
ggggcccccggccctacctcagggccccagggccagtcgcagccctcggcccccagcacc
aagctcagcagtgggaccctccgaagtgccagcagcccccggggcgcccgggcccgctcc
ccatcccgagggaggcaccccgaggaggcgaagaggcagccccgtggacggcccagctcc
agcgggacaccccgggacgggccagctgggggcacagggggctccgggggccccgggggc
tccctgggcagccgcgggagacgccggaagctctactcagcggtccccggacgctccttc
atggctgtgaagtcctaccaggcccaagccgagggggagatctccctgagcaagggcgag
aagatcaaagtgcttagcgtcggggaaggaggcttctgggaaggccaggtcaaaggtcgc
atcggctggttcccctctgactgcctggaagaggtggccaaccgctcccaggaggcaaag
caagaaagccgaagtgacaaggcaaagagactcttccggcattataccgtgggctcctac
gacagctttgatgccccaagcttgatggatgggattggcccagggagcatatatatagtc
aaggagnnnnnngttctgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctg
cagtatctggagtcggtggacgaggggggcgtggcatggcgagccggactgcggatggga
gacttcctcattgaggtgaacgggcagaatgtggtgaaggtcggccaccggcaggtggtg
aacatgatccgccaagggggcaacacgctgatggtcaaggtggtgatggtcacccggcac
ccggacatggatgaggctcttcataagaaagcaccgccgcaggctaagcggctcccgccc
ccaaccatctccctgcgttccaagtctatgacctcagagctggaggagatggtctcgccc
tggaagaagaagagtgagtacgagcagcaacctgcgccggtgcccagcatggagaaaaag
cggaccgtgtatcagatggctctcaacaaactggatgaaattttggcagcagctcagcag
accatcagtgcaagtgagagtcctgggcctggtggcctcgcgtccctgggcaaacaccga
cccaaaggcttctttgccacggagtcgagctttgatccccaccaccgctcccagccaagt
tatgaacgtccttcctacctgcctccaggacctgggctcatgctccggcaaaagtctatt
ggggctacagaagatgagagaccctacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcctggttcggaggacatcccgccgccgcccaccacgtccccaccagagccc
ccctacagcacacctccagccccctcttcctccggccgcctcactccctctccccgggga
gcgcccttcaaccccggctcagcgctgcccccgcccctggagttctccaacagctttgag
aagcccgattcgcccctcacgcctgggcctccccacccgctgccggacccacccaccccg
accagcccggcgccccctgccccgcctcctgccgtgcccgccgcccctcccacgctggac
tccaccgcatccagcctgacttcctatgacagcgaggtggccacgctgacccaggcgggc
cccgcagctgctggggacgcgcctccgccgggcccagcagccccagccgccccgcctccc
cctgccccacagcctggcccggaccctccagctggcacagattctggtatcgaggaggtg
gacagccggagcagcagtgaccacccgctggagaccatcagcagcgcatccacgctgagc
agcctgtctgccgaaggcggggctgggggcggggtggccagtgtggccagtgggccggag
cttctggacacgtatgtggcctacctggacggccaggccttcgggggcagcggtcctcct
ggcccaccatacccaccgcagctcatgactccctctaagctccggggccgggcgcttggg
gccagtggaggcctgcggcctggccccggtgggggactccgagaccctgtcactcccacc
agccccaccgtctcggtgacgggggctggaaccgatgggctgctggccctgagtgcttgc
tcaggaccttcgacggcaggtgtggccggcggtccaggggctgtagagccagaaggccca
ccggtgcccttgccatccgcctcctccctgcctcggaagctgctgccctgggaggagggc
ccgggtccaccgccaccacccctgcctgggcccttagcccagcctcaggcctcagccttg
gccacaggaaaaggcagcatcatcagtgaactcagctccaagcttcagcagtttgggggc
tcctcggcagctggtggcgctctgccctgggcccggggaggcggcgggggaagcggggac
ggccaccacgggggagccagctacgtccccgagaggacttcctccctgcagcggcagagc
ccggtcgccagcctgtttcagaactggtccaaaccacctctgccgccactccccacagga
accggggtgtccgcttcagccgctgcagccccgggggccacctcgccgtcggcctcctcc
tcctccacgtccgcccgccacctccagggcgtggagttcgagatgcggccacctttgctc
cgccgggcccctagcccgtcactgctgcccgcctcggagcacaaggtcagccctgcaccc
cggccctcctccctgcccatcctgccttctggacccctctacccgggcctctttgacatg
cgcggctcccccaccggaggggcaggaggctcggctgaccccttcgcccctgtcttcgtg
ccaccgcaccccgggatgtccggggggctcggtggggccttgtcaggggcctcccgctcc
ctctcaccgacccgcctgctttccctgcccccggacaagccgttcagcgctaaacctctg
gggttctggaccaagttcgacgtggctgattggcttgagtggctgggcttggctgagcac
cgagcccggttcctggaccacgagatcgatggctcccacctgcccgccttgaccaaggag
gactacgtcgatctgggggtgaccagggtgggccaccgcatgaacatcgaccgggctctc
aaattttttctggagaggtga
DBGET
integrated database retrieval system