Balaenoptera acutorostrata scammoni (minke whale): 103006007
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Entry
103006007 CDS
T03086
Symbol
CLP1
Name
(RefSeq) cleavage and polyadenylation factor I subunit 1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103006007 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bacu03019
]
103006007 (CLP1)
Enzymes [BR:
bacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
103006007 (CLP1)
Messenger RNA biogenesis [BR:
bacu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
103006007 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
103006007
NCBI-ProteinID:
XP_007196523
UniProt:
A0A384BAJ5
LinkDB
All DBs
Position
Un
AA seq
444 aa
AA seq
DB search
MVIRGKKKYEARHSSHTEKMGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGM
AEIFGTELTRNKKFTFDAGAKVAVFTWHGCALQLSGRTEVAYVSKDTPMLLYLNTHTALE
QMRRQAEKEEERGPRVMVVGPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPG
TMGALYIERPADVEEGFSIQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRA
SVSGCVINTCGWVKGSGYQALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPK
SGGVVERSKDFRRECRDERIREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPL
GMSQEDNQLKLVPVTPGRDMVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTV
LSPAPRPLPKNFLLIMDIRFMDLK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcagaggtaagaagaagtatgaagcaaggcacagcagccacacagaaaagatg
ggagaggaggccaatgatgacaagaagccaactactaaatttgaactagagcgagaaaca
gaacttcgctttgaggtggaggcctctcagtcagttcagttggagctgctcgctggcatg
gcagaaatctttggcacagagctgacccgaaacaagaaattcacctttgatgctggtgcc
aaggtggctgttttcacttggcatggctgtgctctacagctcagtggccgcaccgaggtg
gcgtatgtctccaaggacacccctatgttgctttatctcaacactcatacagccttggag
cagatgcggaggcaggcggagaaggaagaagagcgagggccccgggtgatggtagtgggc
cccactgatgtgggcaagtccacagtgtgccgtctcctgctcaactacgcagtgcgtttg
ggccgccggcccacttacgtggagttggatgtgggccagggctctgtgtccatccctggt
accatgggggccctctacattgagcggccagcagatgttgaagagggattctctatccag
gcccctctggtgtatcattttggctccaccactcctggcaccaatatcaagctttataat
aagattacatctcgtttagcagatgtgttcaaccaaaggtgtgaagtgaaccgaagggcc
tctgtgagtggctgtgtcattaacacctgtggctgggtcaagggctctggttaccaggca
ctggtgcatgcagcctcagccttcgaggtggatgtagttgtggttctggatcaagaacga
ctgtacaatgaactgaaacgggacctacctcactttgtacgcactgtgctgctccctaaa
tccgggggtgtggttgagcgctccaaggacttccggcgggaatgtagggatgagcgtatc
cgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaaattt
tcagatgtgaaaatctacaaagttggggcacccaccatcccagactcctgtctgcctttg
ggcatgtctcaggaggacaatcagctcaagctagtccccgtcacccctggccgagatatg
gtgcaccacctcctgagtgtcagcactgctgagggcacagaggagaacctttctgagaca
agtgtggctggcttcatcgtggtgaccagtgtggacctagagcatcaggtgtttactgtt
ctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccggttc
atggatcttaagtag
DBGET
integrated database retrieval system
