Balaenoptera acutorostrata scammoni (minke whale): 103007762
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Entry
103007762 CDS
T03086
Symbol
DHX38
Name
(RefSeq) DEAH-box helicase 38
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103007762 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bacu03041
]
103007762 (DHX38)
Spliceosome [BR:
bacu03041
]
Complex C
Other components
Step II factors
103007762 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
T2SSE
nSTAND3
AAA_30
PhoH
Flavi_DEAD
Microtub_bd
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
103007762
NCBI-ProteinID:
XP_007198268
UniProt:
A0A384BFR1
LinkDB
All DBs
Position
Un
AA seq
1227 aa
AA seq
DB search
MEDTSEDASIHRLEGTEVDSQVGGLIFKTKSASSEQHVFKAPAPRPSLLGLDLLASLKRR
EREEKDDGEDKKKSRVSSFKDWEESKDDQRDAEEEGGDQAGHSSRKDRHYRSARVETPSH
PGGVSEEFWERSRQREREWREHGVYASSKEEKDRKKERSRDRDCDRKRDRDERDRNRHSS
RSERDGGSERSGRRNEPESPRHRPKDAATPSRSTWDEEDSGYGSSKRSQWESPSPTPSYR
DSDRSHRLSSRDRDRSVRSRYADDTPLPTPSYKYNEWADDRRHLGSTPRLSRGRGRREDG
EEGISFDTEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEDYVRRREQHLHKQKQ
KRISAQRRQINEDNERWETNRMLTSGVVHRLEVDDDFEEDSAAKVHLMVHNLVPPFLDGR
IVFTKQPEPVIPVKDATSDLAIIARKGSQTVRKHREQKERKKAQHKHWELAGTKLGDIMG
VKKEEEPDKALTEDGKVDYRAEQKFADHMKKKSEASSEFAKKKSILEQRQYLPIFAVQQE
LLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEE
MGGSLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLN
TDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQ
EDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYS
QLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDAL
QIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS
LGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI
VSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTYLNVYLQWKN
NNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDIVRKCICAAYFHQ
AAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYMQCVTAVDGEW
LAELGPMFYSVKQAGKSRQENRRRAKEEASAMEEEMALAEEQLRARRQEQEKRSPLGNVR
STKIYTPGRKEQGEPMTPRRTPARFGL
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccagcgaggatgcctcgatccatcgattggaaggcactgaggtggactcc
caggttggcggtctcattttcaagaccaaaagcgcatctagtgagcagcatgtcttcaag
gcccctgctccccgcccttcattgctgggactagacttgttggcttccctgaaaaggagg
gagagagaggagaaggatgacggggaggacaagaagaagtccagagtctcttcctttaag
gactgggaagagagcaaggatgaccagagggacgctgaggaggagggcggtgaccaggct
ggccacagtagccgaaaagacagacattatcgatctgctcgggtagagactccatcccat
cctggtggtgtgagtgaagagttctgggaacgcagtcggcagagagagcgggagtggcgg
gaacatggtgtctacgcctcgtccaaagaagaaaaggatcggaagaaggagaggtcgagg
gatcgagactgtgaccgcaagagagacagagatgagcgggatagaaacaggcacagcagc
agatcggagcgagatggagggtcagagcgcagcggcagaagaaacgaacctgagagcccc
cgacaccggcctaaagatgcagccaccccttcaaggtctacctgggatgaagaggacagt
ggctatggctcctcaaagcgctcacagtgggaatcgccctccccaacgccttcctatcgg
gattctgaccggagtcatcggctgtccagtcgagatagggacaggtctgtgaggagcagg
tacgcagacgacacgcctctgccaaccccgtcctacaaatacaacgagtgggccgatgac
agaagacatctggggtccaccccacgtctgtccaggggccgagggagacgtgaggatggc
gaagaaggaatttcatttgacacagaagaggaacggcagcaatgggaggacgaccagagg
caagctgaccgggattggtacatgatggatgaggggtatgatgaattccacaacccgctg
gcctactcctccgaggactacgtgaggaggcgggagcagcatctgcacaaacagaagcag
aagcgcatttcggcccagcggaggcagatcaatgaggataacgaacgctgggagaccaac
cgcatgctcaccagcggggtggtgcatcggctggaggtggacgacgactttgaagaggac
agtgcagccaaggtccatctgatggtgcataacctggtgcctccctttctggacgggcgc
atcgtcttcaccaagcagccagagcctgtgattccagtcaaggacgccacttctgacctg
gccattatcgctagaaaaggcagtcaaacggtgcggaagcacagggagcaaaaggaacgc
aaaaaggctcaacacaaacactgggaactggctggaaccaaactgggagatataatgggc
gtcaaaaaagaggaagagccggataaagctctgacagaggacggtaaagtggactacagg
gcagagcagaagtttgcagaccacatgaagaaaaagagcgaagccagcagtgaatttgca
aagaagaagtctattctggagcagaggcagtacctgcccatctttgctgtgcagcaggag
ctgctcacgattatcagagataatagcatcgtgatcgtggttggggagacagggagtggt
aagaccactcagctgacccagtacctgcacgaagacggttacacggactatgggatgatc
gggtgcacccagccccgccgtgtggctgccatgtcggtggccaagagagtcagtgaagag
atggggggcagccttggtgaggaggtgggttatgccatccgtttcgaagactgcacttca
gaaagcaccttgatcaagtacatgaccgatggaatcctgctgcgagagtccctgcgggaa
gcggacctggatcactacagcgccatcatcatggacgaggcccatgagcgctccctcaac
accgacgtgctctttgggctgctccgggaggtggtggctcggcgctcagacctgaagctc
attgtcacgtcggccaccatggatgcagagaaatttgcttccttttttgggaatgtcccc
atcttccatatccctggtcgtacgttccctgttgacatcctcttcagcaagaccccccag
gaggattatgtggaggccgcagtgaagcagtctctgcaggtgcatctgtcaggggccccc
ggggacatccttatcttcatgcctggccaagaggacatcgaggtgacctcagaccagatt
gtggagcatctggaagaactggagaacgcgcccgccttggctgtgctgcccatctattcc
cagctgccttctgacctccaggccaaaatcttccagaaggctccggatggcgttcggaag
tgtattgtcgccaccaacattgctgagacctctctgactgtcgatggcatcatgtttgtt
atcgattctggttattgtaaattaaaggtcttcaaccccaggattggcatggatgctctg
cagatctaccccatcagccaggccaatgccaaccagaggtcggggcgagccggcaggacg
ggcccaggtcagtgtttcaggctctacacccagagcgcctacaagaacgagctcctgacc
accacggtgcccgagatccagcggaccaacctggccaacgtggtgctgctgctcaagtcg
ctgggggtgcaggacctgctgcagttccacttcatggacccgcccccggaggacaacatg
ctcaactccatgtatcagctctggatcctcggggccctggacaacacaggcggtctgacc
tcgactgggcggctgatggtggagttcccgctggacccggccctgtccaagatgctcatt
gtgtcctgtgacatgggctgcagctccgagatcctgctcatcgtctccatgctgtcggtc
ccagccatcttctacaggcccaagggccgagaggaggagagcgatcaaatccgggagaag
ttcgcagtccctgagagcgaccacctgacctacctgaatgtctacctgcagtggaagaac
aacaattactctaccatctggtgtaacgatcatttcatccatgccaaggctatgcggaag
gtccgggaggtgcgggctcagctcaaggacatcatggtgcagcagcggatgagcctggcc
tcgtgtggcaccgactgggacattgtcaggaagtgtatctgtgctgcctatttccaccag
gcagccaagctcaagggaatcggggagtatgtgaatatccggacaggcatgccctgccac
ctgcaccccaccagctccctctttggaatgggctacaccccagactacattgtgtatcac
gagttggtcatgaccaccaaggagtacatgcagtgtgtgactgctgtggacggagagtgg
ctggcagagctgggccccatgttctacagcgtgaaacaggcaggaaagtctcggcaggag
aaccgccgacgggccaaagaggaagcctctgccatggaggaggagatggcactggccgag
gagcagctgcgggcccggcggcaggagcaggaaaagcgcagccccctgggcaatgtcagg
tctacaaagatctacaccccaggtcggaaagagcaaggggaacccatgacccctcgccgc
acaccagcccgctttgggctctga
DBGET
integrated database retrieval system
