Balaenoptera acutorostrata scammoni (minke whale): 103008168
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Entry
103008168 CDS
T03086
Name
(RefSeq) collagen alpha-1(II) chain-like
KO
K19719
collagen type II alpha
Organism
bacu
Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu04151
PI3K-Akt signaling pathway
bacu04510
Focal adhesion
bacu04512
ECM-receptor interaction
bacu04974
Protein digestion and absorption
bacu05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
bacu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103008168
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103008168
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103008168
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103008168
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103008168
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bacu00536
]
103008168
Glycosaminoglycan binding proteins [BR:
bacu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103008168
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
103008168
NCBI-ProteinID:
XP_007179314
UniProt:
A0A383ZWK6
LinkDB
All DBs
Position
Un
AA seq
1418 aa
AA seq
DB search
MIRLGAPQTLVLLTLLVAAVLRCHGQDVRQPGPKGQKGEPGDIKDIVGPKGPPGPQGPAG
EQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDE
KAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVAGPMGPRGPSGPPG
KPGDDGEAGKAGKPGERGLPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKG
ESGSPGENGSPGPMGPRGLPGERGRSGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPG
APGAKGEAGPTGARGPEGAQGPRGEAGTPGSPGPAGASGNPGSDGIPGAKGSAGAPGIAG
APGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEG
KRGSRGEPGGAGPAGPPGERGPPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPG
RPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGTRGQPGVMGFPGPKG
ANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPG
PPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGSQGLQGPRGLPGTPGTDG
PKGAAGPAGPTGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTG
PIGPPGPAGANGEKGEVGPPGPAGTVGARGAPGERGETGPPGPAGFAGPPGADGQPGAKG
EQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPG
SNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPSGPPGEKGEPGDDGPSGPDG
PPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTG
PAGEPGREGSPGADGPPGRDGAAGVKGDRGETGPVGGPGAPGPPGSPGPAGPIGKQGDRG
EAGAQGPMGPSGPAGARGLPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPAG
DQGTSGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPG
PPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADEAADNLRQHDAEVDATLKSLNNQIESI
RSPEGSRKNPARTCRDLKLCHPEWKAGDYWIDPNQGCTLDAMKVFCNMDTGETCVYPSPA
SVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNV
TYHCKNSIAYLDEAAGNLKKALLLQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTM
IEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcggtgtcacggccaggatgtccggcaaccaggaccaaagggacagaaaggagaacct
ggagacatcaaggatattgtaggacccaaaggacctcctgggcctcagggacctgcaggt
gaacaaggacccagaggtgatcgtggtgacaaaggtgaaaaaggtgctcctggacctcgt
ggcagagatggagagcctgggacccctggaaaccctggcccccctggccctcctggcccg
cctggcccccctggtcttggtggaaactttgctgctcagatggctggaggatttgatgag
aaggctggtggagcccagttgggagtaatgcagggaccaatgggccccatgggacctcgg
ggacctccaggccctgctggtgctcccggacctcaaggatttcaaggcaaccctggtgaa
cctggggaacccggcgttgctggtcccatgggtccccgcggtccttctggcccccctgga
aaacctggtgatgatggtgaagctggaaaggctggaaaacctggcgagagaggccttcct
ggccctcagggtgctcgcggcttcccaggaaccccaggccttcctggtgtcaaaggtcac
agaggttacccaggtctagatggtgctaagggagaagctggtgctccaggtgtgaagggt
gagagtggttccccaggagagaacggttctccaggcccaatgggtccccgtggcctgcct
ggtgagagaggacggtccggccctgctggcgccgcgggtgctcggggcaacgatggccaa
cccggccccgcagggcctccgggtcccgtgggtcctgctggcggtcctggcttccccggt
gctcctggtgccaagggtgaagctggccccaccggtgctcgaggtcctgaaggtgcccaa
ggtcctcgcggtgaagctggtactcctgggtcccccgggccggctggtgcttctggtaac
cctggatctgatggaattcctggagctaaaggatctgctggtgcccctggcattgctggt
gctcccggcttccctgggccccgtggtccacccggccctcaaggtgcaactggtcctctg
ggcccgaaaggtcaaacgggtgagcctggtattgctggcttcaaaggtgaacaaggcccc
aagggagaaccgggccctgctggtccccaaggagcccccggtcctgctggtgaagaaggc
aaaagagggtcccgtggagagcctggaggtgctgggcccgctgggccccctggagaaaga
ggtcctcctggcaaccgtgggttcccaggtcaggatggtctggcaggtcccaagggagcc
cctggagagcgagggcccagtggccttgctggtcccaagggagccaatggtgaccctggc
cgtcctggagaacccggcctccctggcgcccggggtctcactggtcgccctggtgatgct
ggtcctcaaggcaaagttggtccttctggagcccctggtgaagatggtcgccctggacct
ccaggtcctcaggggactcgtgggcagcctggtgtcatgggtttccctggccccaaaggt
gccaatggtgagcctggcaaagctggtgagaaaggactgcctggtgctcctggtctgaga
ggtctccctggcaaagatggtgagacaggagctgcaggcccccctggacccgctggacct
gccggggaacgaggcgaacagggtgctcctgggccatctgggttccagggacttcctggc
ccgcccggtcccccaggtgaaggtggaaaaccaggtgaccagggcgttcctggcgaagct
ggagctcctggcctcgtgggtcccaggggtgaacgaggtttcccaggggaacgtggctct
cctgggtcccagggcctccaggggccccgcggcctccctggcactcctggcactgatggt
cccaaaggcgcagctggcccagctggccccactggggctcagggccctccaggtctgcag
gggatgcccggtgagagaggagcagctggcatcgctgggcccaagggagacaggggtgat
gttggtgagaaaggccccgagggagcccccgggaaggacggtggacgaggtctgactggc
cccattggcccccctggcccggccggtgccaacggtgagaagggagaagttggacctcct
ggtcctgcaggaactgttggtgctcgcggcgccccgggtgaacgtggcgagactggaccc
cccggacccgctggatttgccggtcctcctggtgctgacggccagcccggtgccaaaggc
gagcaaggagaggctggccagaaaggtgacgctggtgccccgggtcctcagggcccctct
ggcgctcccgggcctcagggtcctactggtgtgactggtcctaaaggagcccgaggtgct
caaggccccccgggggccaccggattccccggagctgcaggccgcgtcggacccccaggt
tccaatggcaaccctggaccccccggcccccctggtccttctggaaaagatggtcccaaa
ggtgctcgaggagacagtggcccccctggccgagctggtgaccctggcctccaaggtcct
tccggaccccctggcgagaagggagagcctggagatgacggtccttctggtcccgacggt
cctccaggtccccagggtctggctggtcagaggggcatcgttggtctgcctgggcagcgt
ggtgagcgaggattccccggcctgcccggcccatcgggtgagcctggcaagcagggagct
cctggagcatctggagaccgaggcccccctggccccgtgggtcctcccggcctgactggt
cctgcgggtgaacctggacgcgagggaagccctggtgctgacggcccccctggcagagac
ggtgcagctggagtcaagggcgatcgtggtgagaccggtcccgtgggtggccccggagcc
ccagggccccctggctctcctggccccgccggcccaatcggcaagcagggagaccgagga
gaagctggtgcacaaggccccatgggaccctcaggaccagccggagcccggggattgcca
ggtcctcaaggcccccgaggtgacaaaggagaaacgggagaggctggcgagaggggactg
aagggacaccgtggcttcactggtctgcagggtctgcccggcccccccggtcctgctgga
gaccaaggtacttctggtcctgccggtccttctggccccagaggtcctcctggccccgtc
ggtccctctggcaaagatggcgctaatggaatccccggccccattggacctcctggaccc
cgtggacgttcaggcgaaactggccctgctggtcctcctggaaatcctggaccccctggc
cctccaggtccccctggccctggcattgacatgtccgcctttgctggcctaggccagaga
gagaagggccccgaccccctgcagtacatgcgggccgatgaggcagccgacaacctgaga
cagcacgacgccgaggtggatgccacactcaagtccctcaacaaccagatcgagagcatc
cgcagccctgagggatcccgcaagaaccccgctcgcacctgccgggacctgaaactctgc
caccctgagtggaaggcaggagattactggatcgacccgaaccagggctgcaccctggac
gccatgaaggttttctgcaacatggacactggcgagacctgcgtctaccccagcccggcc
agcgtccccaagaagaactggtggagcagcaagagcaaggacaagaaacacatctggttc
ggagaaaccatcaacggtggcttccacttcagctatggagatgacaacctggctcccaac
accgccaacgtccagatgaccttcctgcgcctgctgtccaccgagggctcccagaacgtc
acctaccactgcaagaacagcatcgcctacctggacgaagccgcgggcaacctcaagaag
gccctgctcctccagggctccaacgacgtggagatccgggctgagggcaacagcaggttc
acgtatactgttctgaaggatggctgcacgaaacacaccggtaagtggggcaagactatg
atcgagtaccggtcgcagaagacctcacgcctccccatcattgacattgcacccatggac
ataggagggcccgagcaggaattcggtgtggacatagggcctgtctgcttcttgtaa
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