KEGG   Balaenoptera acutorostrata scammoni (minke whale): 103011820Help
Entry
103011820         CDS       T03086                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bacu  Balaenoptera acutorostrata scammoni (minke whale)
Pathway
bacu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bacu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    103011820 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bacu03400]
    103011820 (LIG4)
Enzymes [BR:bacu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103011820 (LIG4)
DNA repair and recombination proteins [BR:bacu03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     103011820 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV DNA_ligase_A_C BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme LIG3_BRCT APG17
Motif
Other DBs
NCBI-GeneID: 103011820
NCBI-ProteinID: XP_007196834
LinkDB All DBs
Position
Un
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLKPRCLQKGSLTIQQVNDILDSIANNNAAQRKDLVKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQQTVFSVFHNDAAELHNVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLATIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYRYFSRNGYNYED
QFGSSPQEGSLTPFIHNTFKTDVQNCILDGEMMAYNPNTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNDKKLGQETLRKRYEILNSVFMPIPGRIEIVQKTQAHTKKEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVNGLMDELDILIVGGYWGKGSRGGMM
SHFLCAVSEKPPSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHRKAPPSCILC
GTEKPEVYIEPWNSVIVQVKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTSLEDLE
QLRGKASGKLASKHLYVGDDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNVNKVSNIFE
DVEFCVMSGTNSHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVKNIISSDKHDV
VKPEWLLECLETKSCVPWQPRFMIHMCPSTKQHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKNAGEQTPREMGPVIADLEHRYSWDNTPLSMFRHHTIYLDLYTVINDLNTKIEGARLAI
TALELQFHGAKVVSCLAEGVSHVIIGEDQSRVADFKAFRRTLKRKFKILQERWVTESIDK
SELQEENQYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcacaaacttcacagactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtgcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaagtttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagccatgagacttattcttcctcagctggaaagagagagaatg
gcctatggcatcaaagaaactatgcttgctaagctttatattgaattgcttaacttacct
cgagaaggaaaagatgccctcaaacttctaaactacagaacacctaccggaactcgtgga
gatgctggagactttgcgatgattgcgtactttgtgttgaaacccagatgtttacagaag
ggaagtttaaccatacagcaggtaaatgacattttagactccattgccaacaataatgct
gcccaaaggaaggacctagtaaagaagagtgttcttcagcttataactcagagttcagca
cttgaacaaaagtggctgatacggatgattgtaaaggacttgaagcttggttttagtcag
caaactgtattttctgtttttcataatgatgctgctgagttgcataatgtcaccacagat
ctggaaaaggtctgtaggcaactgcatgatccttcagttgggctcagtgacatttctatc
actttattctctgcctttaaacccatgctggccactatagcagatatcgagcgaattgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagatggtgagcgtatgcaa
atgcacaaggatggggacgtgtatcggtacttctcccgcaatggatataactatgaggat
cagtttggttcttccccacaggaaggttcccttacaccgttcatccataatacattcaaa
acagatgttcaaaactgcatccttgatggtgagatgatggcctataaccctaatacacaa
acttttatgcaaaaggggaataagtttgatattaaaagaatggtagaagattctgatctg
caaacttgttactgtgtttttgatgtattgatggttaatgataaaaagctagggcaggag
acactgagaaagaggtatgaaattcttaatagtgtttttatgccaataccaggtagaata
gaaatagtgcaaaaaacacaagctcatactaagaaagaagtaattgatgctttgaatgaa
gcaatagataaaagagaagaggggatcatgataaaacatcctctgtccatttacaagcca
gataaaagaggtgaaggatggttaaaaattaaaccagagtatgtaaatggactgatggat
gaactggacatcttaattgtggggggctactgggggaaaggttcccggggtggaatgatg
tctcattttttgtgtgcggtgtcagagaaacccccttctggtgaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aagttggccaaacactggaagccttttcataggaaagctccaccaagttgcattttatgt
ggaacagagaagccagaggtctacatcgaaccttggaattcggtcattgttcaggttaag
gccacagagatcgtccccagtgatatgtataaaactggctgcacgttgcgttttccacga
attgagaagataagagaagacaaagaatggcatgaatgtacatctctggaggacttagaa
caacttcgagggaaagcctccggaaagcttgcgtctaaacacctttatgtgggtgatgat
gatgaaccacaagaaaaaaagcggaaagctgccccaaagatgaagaaagttattggaatt
attgagcacctaaaagcacccaacctttctaacgtaaacaaagtttctaatatatttgaa
gatgtggagttttgtgtcatgagtggaacaaacagccatccaaagccggatctggagaac
agaatcgcagaatttggtggttacatagtccaaaatccaggcccagacacatactgtgtg
attgcagggtctgagaacattcgagtgaaaaacatcatctcttctgataaacacgatgtt
gtcaagccggagtggctgctagagtgtttagagaccaaaagctgtgtgccgtggcagcct
cgcttcatgatccacatgtgcccgtcaacaaaacagcacttcgcccgggaatacgactgc
tacggggatagttactttgtcgatacagatttgaaccaactgaaggaagtgttctcggga
attaaaaatgctggtgaacagactcctagggaaatgggtcctgtgattgccgatttggaa
caccggtattcctgggacaacactcctcttagcatgtttcgacaccacaccatttatttg
gacttgtatactgttattaatgacttaaatactaaaatcgagggggcaagattagctatc
acagccctggagcttcaatttcatggagcaaaagtagtttcctgcttagctgagggagtg
tctcatgtcatcattggggaggatcagagtcgggttgcagactttaaagcttttcgaaga
actcttaagagaaagtttaaaatcctacaagaacgttgggtaactgaatcaatagacaag
agtgaactacaggaggaaaatcaatatttggtttga

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