Heyndrickxia coagulans 36D1: Bcoa_0011
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Entry
Bcoa_0011 CDS
T01628
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bag
Heyndrickxia coagulans 36D1
Brite
KEGG Orthology (KO) [BR:
bag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bag03016
]
Bcoa_0011
Enzymes [BR:
bag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bcoa_0011
Transfer RNA biogenesis [BR:
bag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bcoa_0011
Prokaryotic type
Bcoa_0011
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AEO99236
UniProt:
G2TJG5
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All DBs
Position
complement(10221..11123)
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AA seq
300 aa
AA seq
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MDGILPLWKPAGMTSHDCVFKIRKLFGTKKAGHTGTLDPDVEGVLPVCIGRATKIAEYLQ
DAGKTYEGEATIGISTTTEDASGDIIEKKEISRPISREEILAALASFTGHITQIPPMFSA
VKVNGRRLYEYARAGIEVERPKRNVQIYSLELLDGREYFEGPVVSFRFRASCSKGTYIRT
LAVMIGEKLGYPAHMSNLTRIEAGGFSKEQCATFQEIEKAAETGDRESLLYPLEAGIRHL
PKWEISDTLAEKVKNGAVLKKPETWPETGDRLAVFFRGKILAVYVAHSGRPGFIKPAKVI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggatggcattttaccgctctggaaaccggcggggatgacttcccatgactgtgttttt
aaaatccggaagcttttcggcacaaaaaaagcaggccataccggcacgcttgatccggat
gtggaaggggtcctcccggtttgcatcgggcgtgcgacaaagattgccgaataccttcag
gatgccggcaaaacttacgaaggtgaagcaacgatcgggatttcaacgacgacagaagat
gcttccggcgatatcattgaaaaaaaggaaattagccggccgatcagccgggaagaaatt
ttagccgcactcgcttcgtttaccgggcatattacccagatcccgccgatgttttccgcc
gtcaaggtgaacggaagaaggttgtatgaatatgcgcgggcgggcatcgaagtggaacgc
cctaaaaggaatgtgcaaatttacagccttgaactattggacgggcgggaatattttgaa
gggccggttgtgtcgttccgtttccgcgcttcatgcagcaaaggcacctatatccgcacg
cttgctgttatgatcggagaaaagctcggctatccggcacatatgtccaatcttacaaga
attgaagcaggcggtttttcaaaggaacaatgcgccacctttcaggagattgaaaaagcc
gcggaaaccggcgacagggaaagcctgctctacccgctcgaggccgggatccgccatttg
ccgaaatgggaaattagtgatacattagcagagaaagtaaagaacggtgccgtgttgaaa
aaaccggagacctggccggaaacaggagacaggcttgctgtctttttccgcggaaaaata
ctcgcggtatacgtggcgcattccggcaggcccggctttatcaaaccggcgaaagtgata
taa
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