Brevibacillus agri: BA6348_16970
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Entry
BA6348_16970 CDS
T05855
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bagr
Brevibacillus agri
Pathway
bagr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bagr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BA6348_16970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bagr03019
]
BA6348_16970
03400 DNA repair and recombination proteins [BR:
bagr03400
]
BA6348_16970
Enzymes [BR:
bagr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BA6348_16970
Messenger RNA biogenesis [BR:
bagr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BA6348_16970
DNA repair and recombination proteins [BR:
bagr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BA6348_16970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAV14308
LinkDB
All DBs
Position
complement(3465235..3466743)
Genome browser
AA seq
502 aa
AA seq
DB search
MDKELHDYLKEYFGYEAFRPGQAAIIKRVLGGQSVLGLMATGGGKSVTYQLPALLLPGIT
VVVSPLISLMVDQVQQLRTKRRIPAAYLNSTQDPAEAREVLQKIAAGACKLLYISPEKLQ
QPYVQQVLGRARVSLLAIDEAHCISAWGHDFRTDYLRLPDTLKQLGNPPVLAVTATATTA
VRNEICSLFGIAQEHVVVQSLNRANIAFDLAEVNGESERRQLTFELMDRLEGPGIVYCST
RQAVDVLVAAYQLDGKRRVDGYHGGMNSIERMLIQTQFLAGELDVIIATNAFGMGIDKPD
IRYVIHYQMPASLEAYSQEIGRIGRDGRPGYAMLLYAQEDIQIHQYMLDKEYPTPVQIQQ
FIQYYRGGAALDAQALAMIDMSEEMAAMLTFYTERALSRAQVSSTHEIANPVHDIWQETE
KRKAVKRKKLSEMVSYVLADSCLRKHLNQYFGEADHGYDRFCCSRCGLQRQAYEGQQPAL
MQPEAQNSWSLRQALDKLLPKK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggataaagagttgcacgactatttgaaggagtatttcggctacgaggcattccggccg
ggccaagcggctatcataaaacgagtgctaggcggacagagcgtcctcggcctgatggca
acgggcggcgggaaatcggtcacctatcagcttcctgccttgctgttgccgggtatcacg
gtggtggtttccccgctcatttcgctcatggtcgatcaggttcagcaactgcgcacgaaa
aggcgcatacctgccgcctatttaaacagcacgcaagacccggcagaggcgcgggaagtg
ttgcagaagatcgcggctggcgcctgcaagctgctgtacatttcgccggaaaagctgcag
cagccctacgtccagcaagtgctgggccgcgcgcgggtgtcgcttctggcgattgacgaa
gcccactgcatctccgcgtggggacacgattttcgcaccgattacttgcggctgccggac
acgctaaaacagctcggcaatccgcccgtgctggctgtgaccgcgacggcgacgacagcg
gtgcgcaatgaaatctgctccctgttcgggattgcgcaggaacatgtcgtcgtgcaatcg
ctcaatcgggcaaacatcgcgtttgatctggcggaagtgaacggggaaagcgagcggcgc
caactgacgttcgagctgatggacaggctggaagggccgggaatcgtctattgcagcacg
cggcaggccgtcgatgtgctcgtggctgcgtatcagctcgacgggaaaaggcgcgtggac
ggttaccacggaggcatgaacagcatagagcggatgctgatccagacgcagtttctggcg
ggcgaactggacgtcatcatcgcgacgaacgcatttggcatgggcatcgacaagccggat
attcgctacgtcattcactaccagatgccagcaagcctggaggcgtactcgcaggagatc
ggcaggatcggccgcgatggacggcccggctatgccatgctgctgtacgcccaggaggac
atccagattcatcagtacatgctggacaaggaatacccgactcctgtgcaaatccagcag
tttatccaatattaccgcgggggagcggccctggatgcccaggcattggccatgatcgac
atgtccgaggaaatggcggccatgctcaccttttatacagagcgtgccctgtcccgggcg
caggtgagcagcacacacgaaatagccaatcccgtccatgatatttggcaggagacggaa
aagcgaaaggccgtcaagcgaaaaaagttgtccgaaatggtatcgtacgtgctcgccgac
agttgtctgcgcaagcatttgaatcaatactttggcgaagcagaccacggctatgaccgt
ttttgctgctcgcgctgcggattgcagcggcaagcttacgaagggcagcagcccgcgctg
atgcagccggaagcacaaaacagttggagtttgcggcaggcattggacaagcttttgccg
aaaaaataa
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