Bacillus anthracis CDC 684: BAMEG_5388
Help
Entry
BAMEG_5388 CDS
T00886
Symbol
vacB
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bah
Bacillus anthracis CDC 684
Pathway
bah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BAMEG_5388 (vacB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bah03019
]
BAMEG_5388 (vacB)
03016 Transfer RNA biogenesis [BR:
bah03016
]
BAMEG_5388 (vacB)
Enzymes [BR:
bah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BAMEG_5388 (vacB)
Messenger RNA biogenesis [BR:
bah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BAMEG_5388 (vacB)
Transfer RNA biogenesis [BR:
bah03016
]
Prokaryotic type
tRNA degradation factors
BAMEG_5388 (vacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
ACP17062
LinkDB
All DBs
Position
complement(4838028..4840454)
Genome browser
AA seq
808 aa
AA seq
DB search
MEEIIQEHIDKLLLFMREEAYKPLTIQELEEAFGIEGSEGFKDFVKALVTMEEKGLVIRT
RSNRYGLPEKMNLIRGKLIGHARGFAFVVPDEKKTGDDDLFIPPTELNGALHGDTVLARL
SSQSSGSRQEGSIVRILERGTKELVGTYTESKNFGFVIPDNKRWTSDIFVLKSASMGAVE
GHKVVVKITSYPENRLSAEGEVIQILGHKNDPGVDILSVIHKHHLPLAFPEEVMEHANSV
PETISEEDLKDRRDLRDQMIVTIDGADAKDLDDAVTVTKLENGNYKLGVHIADVSHYVQE
GSPIDVEAAERATSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEINNLGDVVKH
EIFQSVIKTTERMTYADVRSILEDEDEELMKRYEPLVPMFKEMGQLAQILREKRMRRGAI
DFDFKEAKVLVDEEGKPTDVVMRDRSVSEKLIEEFMLVANETVAEHFHWMNVPFMYRVHE
DPKEDKLERFFEFVTNFGYAVKGRANEVHPRALQQILEMVQGQPEEVVISTVMLRSMKQA
RYDADSLGHFGLSTEFYTHFTSPIRRYPDTIVHRLIREYIINGKVDNETQAKWREKLPEI
AEHSSNMERRAVEAERETDELKKAEYMLDKIGEEYDGMISSVTNFGLFVELPNTIEGLVH
VSYLTDDYYRYDEQHFAMIGERTGNVFRIGDEITIRVINVNKDERAIDFEIVGMKGTPRR
KFKDRPVVIEQPRTGRKKRGGRSERSNERGGERGTGRKFDRGGKGKGRGSASASTSASQP
GKKDGNGKKKKAFFENVPGFKKKKKKRK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaaatcatacaagaacatattgataagttgttattatttatgagagaagaagcg
tataaaccgctaacgatacaagagttagaagaggcatttgggattgaaggttccgagggc
tttaaagatttcgtaaaggcacttgtaacgatggaagaaaagggactcgttattcgtact
cgtagcaaccgttacggtcttcctgaaaagatgaatttaatacgtggtaagttaattgga
catgcacgtggttttgcatttgttgtaccagacgagaagaaaacgggagacgatgatctt
ttcatcccacctacagaattaaacggtgcgcttcatggtgatacagtattagcacgcctt
agttcccaatcgagtggttcgcgtcaagaaggttctattgtacgcattttagaacgtgga
acgaaagaactagttggtacatatacagaatcgaaaaactttggatttgttatacctgac
aataagcgctggacgagtgacattttcgtattgaaaagtgcatcaatgggtgctgtagaa
ggtcataaagtagttgtgaaaattacgagctatccagagaatcgtttaagtgcagaaggt
gaagttattcaaattctaggtcataaaaatgacccaggagtagatattttatctgttatt
cataaacatcatttacctttagcattcccagaggaagtgatggaacacgcaaacagtgta
ccagaaacgatttcagaggaagatttaaaagatcgccgtgacctgcgtgaccaaatgatc
gtaacaattgacggtgcagacgcaaaagatttagatgacgctgttacagtaacaaagctt
gagaacggtaactataaacttggcgttcatattgcggatgtaagtcattacgttcaagaa
ggttctccaattgatgtagaagcagcggagagagcgacgagtgtatatcttgttgaccgt
gtaattccaatgatcccgcatcgtctatctaacggtatttgttcattaaatccgaaagta
gaccgtctgacgttatcttgtgaaatggaaattaacaatttaggtgacgttgtaaaacac
gagattttccaaagtgtgattaaaacgacagagcgtatgacgtatgctgacgtaagaagc
attttagaagatgaggacgaagaattaatgaaacgctatgagccgctcgtaccgatgttt
aaagagatggggcaattagcacaaattttacgtgaaaaacgtatgcgccgcggggcaatc
gactttgactttaaagaagcgaaagtattagtagatgaagaaggaaaaccgacagatgtt
gttatgcgtgatcgttctgtatcagagaagttaattgaagaatttatgcttgttgcaaac
gaaacagtagcagagcacttccactggatgaacgtaccattcatgtaccgtgtccatgaa
gatccgaaagaagataagttagagcgtttcttcgagtttgtaacgaacttcggatatgca
gtaaaaggacgtgcgaatgaagtacatcctcgcgcgctacaacaaattcttgaaatggtt
caaggacagccagaagaagtagtaatctcaacagttatgcttcgttctatgaagcaagca
cgttacgatgcagatagcttaggacatttcggtttatcaactgagttctacacacatttc
acatcgccaattcgtcgttacccagatacgattgttcatagattaattcgtgaatacatc
attaacggtaaagtcgacaatgaaacacaagcaaagtggcgtgaaaaattacctgagatt
gcagagcactcttctaatatggagcgtcgtgctgttgaagcagaacgtgaaacagatgag
ctgaaaaaagcagaatatatgcttgataagattggcgaagagtatgacggtatgattagc
tctgtaacaaacttcggtttattcgtagagcttccaaatacaattgaaggtcttgtacac
gttagctacttaacggatgattactaccgttacgatgagcagcatttcgcaatgatcgga
gaacgtacaggtaacgtattccgcatcggtgacgaaattacaattcgtgttattaatgta
aacaaagacgagcgtgcaatcgactttgaaatcgttggcatgaaaggtacacctcgtcgt
aagttcaaagaccgcccagtcgttattgaacagccaagaacaggtagaaagaaacgcggt
ggacgtagcgagcgcagtaatgagcgcggcggagaacgtggcacaggaagaaaatttgac
cgtggtggcaaagggaaaggaagaggatctgcatccgcatctacgtccgctagccagcca
gggaaaaaagatggtaacggcaagaagaaaaaagcattcttcgaaaacgtaccaggattc
aagaagaaaaagaaaaagcgtaagtaa
DBGET
integrated database retrieval system
