Bacillus sp. LM 4-2: BsLM_2982
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Entry
BsLM_2982 CDS
T03908
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
balm
Bacillus sp. LM 4-2
Brite
KEGG Orthology (KO) [BR:
balm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
balm03016
]
BsLM_2982
Enzymes [BR:
balm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BsLM_2982
Transfer RNA biogenesis [BR:
balm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BsLM_2982
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
HVSL
Motif
Other DBs
NCBI-ProteinID:
AKE24780
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All DBs
Position
complement(2921753..2922394)
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AA seq
213 aa
AA seq
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MRECFHTLFLYPHSLFIDKIIAVKEGSVRRMPDIRPHYFIGVPIPEGIANPIYQAAKNEP
ILTFQKWVHPLDYHITLIFLGAADETQIKKLEGSLAEIASEIDPFSIKFGKIDVFGDRRK
PRVLHLEPKKNKTLDRLREHTKQAVLQAGFQVEKRPYHPHMTLARKWTGEDGFPAHVPFE
SGEVSMMAERFSLFQIHLNQSPKYEEIFKFQLS
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagagtgttttcatacactgttcctctatccgcacagcctctttattgataaaata
atagctgtcaaagaagggagtgtcagacggatgccagatatacggcctcattatttcatc
ggcgttcccatacctgagggaattgcaaatccgatctaccaggctgcgaaaaacgaaccg
atattgacgtttcaaaaatgggtgcacccgcttgactatcatatcacgttaatttttctc
ggagcggcggatgagacacaaataaagaagcttgaaggttcgctagcagagattgcttca
gaaattgatccattttcaattaagtttggcaagatagatgtattcggcgaccgcagaaag
ccgcgcgttttacatctggagccaaagaaaaacaaaacgcttgatagactgcgggaacat
acgaagcaggctgtacttcaggccggctttcaagtggaaaaaagaccgtatcatcctcat
atgacgctggcaagaaaatggacaggcgaagatggatttccagctcatgttccgtttgaa
agcggcgaggtttcgatgatggctgaacgattttcgctctttcaaatacacttgaaccaa
tcaccaaaatacgaggaaatattcaaatttcaattatcttaa
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