KEGG   Burkholderia ambifaria AMMD: Bamb_0465
Entry
Bamb_0465         CDS       T00398                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
bam  Burkholderia ambifaria AMMD
Pathway
bam00470  D-Amino acid metabolism
bam00550  Peptidoglycan biosynthesis
bam01100  Metabolic pathways
bam01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:bam00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Bamb_0465
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Bamb_0465
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Bamb_0465
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:bam01011]
    Bamb_0465
Enzymes [BR:bam01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Bamb_0465
Peptidoglycan biosynthesis and degradation proteins [BR:bam01011]
 Precursor biosynthesis
  Amino acid ligase
   Bamb_0465
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N CPSase_L_D2 ATP-grasp ATPgrasp_ST ATP-grasp_4 TTL ATPgrasp_YheCD PPR
Other DBs
NCBI-ProteinID: ABI86024
UniProt: Q0BIJ9
LinkDB
Position
1:527936..528877
AA seq 313 aa
MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLSALKDE
GFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPP
FETVMRGDDYAARATDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAATHDKI
VIVEKSIEGGGEYTACIAGDLDLPLIKIVPAGEFYDYHAKYVANDTQYLIPCGLPAEQET
ELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHSLPPKAARSIGISYS
ELVVKVLALTLND
NT seq 942 nt   +upstreamnt  +downstreamnt
atgagcggaatcgatccgaaacgtttcggcaaggtggcagtgttgttcggcggcgaatcc
gccgagcgcgaggtgtcgctcacctcgggccgcctcgtgctgcagggcctgcgcgacgcg
ggcatcgacgcgcatccgttcgacccggccgagcggccgctgtcggcactgaaggatgaa
ggcttcgtgcgcgcgttcaacgcgctgcacggcggctatggcgagaacggccagatccag
ggcgcgctcgatttctacgggatccgctacacgggcagcggcgtgctcggctcggcgctc
ggcctcgacaagttccgcacgaagctcgtgtggcagcagacgggcgtgccgacgccgccg
ttcgagacggtgatgcgcggcgacgactacgcggcgcgcgcgacggacatcgtcgcgaag
ctcggcctgccgctgttcgtgaagccggcgagcgaaggctcgagcgtcgcggtgctgaag
gtcaagacggccgacgcgttgcccgccgcactgtcggaagccgcgacgcacgacaagatc
gtgatcgtcgagaagagcatcgaaggcggcggcgaatacaccgcgtgcatcgccggcgat
ctcgatctcccgctgatcaagatcgtgccggcgggcgagttctacgactaccacgcgaag
tatgtcgccaacgacacgcagtacctgattccgtgcgggctgccggcggagcaggaaacc
gaactgaagcgcatcgcgcgccgcgcgttcgatgtgctcggctgcaccgactggggccgc
gcggatttcatgctcgacgccgccggcaacgcgtatttcctggaagtgaacacggccccc
gggatgaccgaccattcgctgccgccgaaggccgcgcgctcgatcggcatcagctattcg
gagctggtcgtgaaggtgctggcgcttacgctcaacgactga

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