Burkholderia ambifaria AMMD: Bamb_0465
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Entry
Bamb_0465 CDS
T00398
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00470
D-Amino acid metabolism
bam00550
Peptidoglycan biosynthesis
bam01100
Metabolic pathways
bam01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bamb_0465
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Bamb_0465
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Bamb_0465
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bam01011
]
Bamb_0465
Enzymes [BR:
bam01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Bamb_0465
Peptidoglycan biosynthesis and degradation proteins [BR:
bam01011
]
Precursor biosynthesis
Amino acid ligase
Bamb_0465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp
ATPgrasp_ST
ATP-grasp_4
TTL
ATPgrasp_YheCD
PPR
Motif
Other DBs
NCBI-ProteinID:
ABI86024
UniProt:
Q0BIJ9
LinkDB
All DBs
Position
1:527936..528877
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AA seq
313 aa
AA seq
DB search
MSGIDPKRFGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAERPLSALKDE
GFVRAFNALHGGYGENGQIQGALDFYGIRYTGSGVLGSALGLDKFRTKLVWQQTGVPTPP
FETVMRGDDYAARATDIVAKLGLPLFVKPASEGSSVAVLKVKTADALPAALSEAATHDKI
VIVEKSIEGGGEYTACIAGDLDLPLIKIVPAGEFYDYHAKYVANDTQYLIPCGLPAEQET
ELKRIARRAFDVLGCTDWGRADFMLDAAGNAYFLEVNTAPGMTDHSLPPKAARSIGISYS
ELVVKVLALTLND
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaatcgatccgaaacgtttcggcaaggtggcagtgttgttcggcggcgaatcc
gccgagcgcgaggtgtcgctcacctcgggccgcctcgtgctgcagggcctgcgcgacgcg
ggcatcgacgcgcatccgttcgacccggccgagcggccgctgtcggcactgaaggatgaa
ggcttcgtgcgcgcgttcaacgcgctgcacggcggctatggcgagaacggccagatccag
ggcgcgctcgatttctacgggatccgctacacgggcagcggcgtgctcggctcggcgctc
ggcctcgacaagttccgcacgaagctcgtgtggcagcagacgggcgtgccgacgccgccg
ttcgagacggtgatgcgcggcgacgactacgcggcgcgcgcgacggacatcgtcgcgaag
ctcggcctgccgctgttcgtgaagccggcgagcgaaggctcgagcgtcgcggtgctgaag
gtcaagacggccgacgcgttgcccgccgcactgtcggaagccgcgacgcacgacaagatc
gtgatcgtcgagaagagcatcgaaggcggcggcgaatacaccgcgtgcatcgccggcgat
ctcgatctcccgctgatcaagatcgtgccggcgggcgagttctacgactaccacgcgaag
tatgtcgccaacgacacgcagtacctgattccgtgcgggctgccggcggagcaggaaacc
gaactgaagcgcatcgcgcgccgcgcgttcgatgtgctcggctgcaccgactggggccgc
gcggatttcatgctcgacgccgccggcaacgcgtatttcctggaagtgaacacggccccc
gggatgaccgaccattcgctgccgccgaaggccgcgcgctcgatcggcatcagctattcg
gagctggtcgtgaaggtgctggcgcttacgctcaacgactga
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