Burkholderia ambifaria AMMD: Bamb_1019
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Entry
Bamb_1019 CDS
T00398
Name
(GenBank) Excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Bamb_1019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_1019
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Bamb_1019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
UVR
HHH
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABI86578
UniProt:
Q0BGZ5
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All DBs
Position
1:1107945..1109999
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AA seq
684 aa
AA seq
DB search
MTSPEAVDIPFEPKKILAQLPHMPGVYRYYDTAGAVLYVGKARDLKKRVSSYFTKTQLSP
RIAMMVTRIARIETTVTRSEAEALLLENNLIKALAPRYNILFRDDKSYPYLKLTAHRFPR
MAYYRGSVDKQNQYFGPFPSAWAVRESIQILQRVFQLRTCEDSVFNNRTRPCLLHQIGRC
TAPCVGAISADDYAIDVSNAARFLLGRQSEVMKELEQKMHAFAAELKFEQAAAVRNQMSS
LATVLHQQAIEVGSDSDVDILAVVAQGGRVCVNLAMVRGGRHLGDKAYFPAHVESALTLA
EGGLGDEADGADGADEAAAALPGEPADEAAAARDAASSASGASSASVEAEVLDAFIAQHY
LGNRVPPVLVVSHAPASRDLLELLSEQAGHKVSLVRQPQGQRRAWLSMAEQNARLALARL
LSEQGSQQARTRALAETLSFECDDLAMLRIECFDISHTMGEATQASCVVYHHHKMQSGEY
RRYNITGITPGDDYAAMRQVLTRRYEKMVEQAAQAAAADAAAGIDGESTREAEASSLLPN
IVLIDGGKGQVEIARQVFTELGLDTSMLVGVAKGEGRKVGLETLVFADGRTPLELGKESA
ALMLVAQIRDEAHRFAITGMRAKRAKARQTSRLEELEGIGAKRRQRLLARFGGLRGVVAA
SVEELASVEGISHALAEQIYKQLH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccagaagccgtcgacatcccgttcgaaccgaagaagatcctcgcccagttg
ccgcacatgccgggcgtctaccgctactacgacacggcgggcgccgtgctttacgtcggc
aaggcgcgcgacctgaagaagcgcgtgtcgagctatttcacgaagacgcagctgtcgccg
cgcatcgcgatgatggtcacgcgcatcgcgcgcatcgagacgaccgtcacgcgctccgag
gccgaggcgctgctgctcgagaacaacctgatcaaggcgctcgcgccgcgctacaacatc
ctgtttcgcgacgacaagtcgtatccgtacctgaagctcaccgcgcaccgctttccgcgc
atggcctactaccgcggctcggtcgacaagcagaaccagtatttcggaccgttccccagc
gcgtgggccgtgcgcgagagcatccagatcctgcagcgcgtcttccagttgcgcacctgc
gaggattccgtcttcaacaaccgcacgcggccgtgcctgctgcatcagatcgggcgctgc
acggcgccgtgcgtcggcgcgatttccgcggacgactacgcgatcgacgtgtcgaacgcc
gcgcgtttcctgctcggccggcagtcggaagtgatgaaggagctcgagcagaagatgcac
gcgttcgcggccgagctgaagttcgagcaggcggcggccgtgcgcaaccagatgagttcg
ctcgcgacggtgctgcaccagcaggcgatcgaggtcggcagcgacagcgacgtcgacatc
ctcgcggtggtcgcgcagggcggacgcgtgtgcgtgaacctggcgatggtgcgcggcggc
cggcatcttggcgacaaggcctatttccccgcgcatgtcgaaagtgcgctgacgcttgcc
gaaggtggcctcggcgacgaagccgacggtgcggatggtgccgacgaagccgccgcggcg
ttgcccggcgagcccgcggacgaagctgccgccgcgcgtgacgcggcgtcgtcggcgtcg
ggggcatcgtcggcatcggtcgaggccgaggtgctcgatgcgttcatcgcgcagcactat
ctcggcaatcgcgtgccgcccgtgcttgtcgtgagccatgcgcccgccagccgcgacctg
ctcgagctgctgtccgagcaggccggtcacaaggtttcgctggtgcggcagccgcagggg
cagcggcgcgcatggctgtcgatggctgaacagaatgcccggctcgcgcttgcgcggctg
ctgtccgagcagggctcgcagcaggcgcgcacgcgcgcgctcgcggagacgctcagcttc
gaatgcgacgatctcgcgatgctgcggatcgagtgtttcgacatcagtcacacgatgggc
gaggcgacgcaggcgtcgtgcgtcgtctaccaccatcacaagatgcagtcgggcgagtac
cgtcgctacaacatcaccggcatcacgccgggcgacgattacgcggccatgcggcaggtg
ctgacgcgccgctacgagaagatggtcgagcaggccgcgcaggctgccgccgccgacgcg
gcagccggcatcgacggcgaatcgacgcgcgaggccgaggcgtcgagtttgctgccgaac
atcgtgctgatcgacggcggcaagggacaggtcgagatcgcgcggcaggtgttcaccgag
ctcgggctcgacacgtcgatgctggttggcgtcgcgaagggcgaggggcgcaaggtcggc
ctcgagacgctcgtgttcgcggacggccgcacgccgctcgaactcggcaaggagagcgcc
gcgctgatgctcgtcgcgcagatccgcgacgaggcgcaccgctttgcgatcaccgggatg
cgcgcgaagcgggcgaaggcacgccagacgtcgcggctcgaggagctcgaagggatcggc
gcgaaacgccgtcagcggctgctcgcgcggttcggcgggctgcgcggggtggtcgccgcg
agcgtcgaggaactggcgagcgtcgagggcatctcgcacgcgctcgccgagcagatctac
aagcagcttcactga
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