Burkholderia ambifaria AMMD: Bamb_1384
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Entry
Bamb_1384 CDS
T00398
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bam
Burkholderia ambifaria AMMD
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bam03016
]
Bamb_1384
Enzymes [BR:
bam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Bamb_1384
Transfer RNA biogenesis [BR:
bam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Bamb_1384
Prokaryotic type
Bamb_1384
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ABI86942
UniProt:
Q0BFY1
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All DBs
Position
1:1521500..1522432
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AA seq
310 aa
AA seq
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MTNAASQRPRVPRRALDGVLLLDKPVGLSSNDALIRAKRLLLAKKAGHTGTLDPLASGLL
PLCFGEATKFSQDLLEADKTYEATMRLGVRTTTGDAEGDVLDTRAVECDRAAVEAALARF
TGEIVQVPPMYSALKRDGKPLYEYARAGQTVEREGRNVTILALDLLACELPDVTFRVTCS
KGTYVRTLAEDIGEALGCGAHLTMLRRTGVGALTLEHAVTLDALSDADEAARDAWLQPVD
ALLSTFPLVRLDEAGAKRFLHGQRLPLSALDPIDAAEGERVRVYDAARLLGVARKANGVL
APERLVVTAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgcagcctcccagcgtccgcgcgtgccccggcgcgcgctggacggcgtcctc
ctgctcgacaagccggtcggcctgtcgagcaacgacgccctgattcgcgcgaagcgcctg
cttctcgcgaagaaagccggtcacaccggcacgctcgatccgctggcctcgggcctgttg
ccgttgtgcttcggcgaggcgacgaagttctcgcaggacttgctggaagcggacaagacc
tacgaagcgacgatgcgtctgggcgtgcgcacgaccaccggcgacgcggaaggcgacgtg
ctcgacacacgcgcggtcgaatgcgatcgcgcggcggtggaagccgcactcgcacgtttt
accggcgagatcgtgcaggtgccgccgatgtattcggcgctcaagcgcgacggcaagccg
ctgtacgaatatgcgcgcgcgggccagacggtcgaacgggaaggccgcaacgtgacgatt
cttgcactcgacctgctggcctgcgagctgccggacgtgacgtttcgcgtgacctgcagc
aagggcacgtatgtgcgtacgctggccgaagatatcggcgaagcgctcggttgcggcgcg
catctgacgatgttgcgtcgtacgggtgtcggcgcgctgacgctcgagcatgcggtgacg
ctcgacgcgctgtccgatgcggacgaagcggcgcgcgatgcgtggcttcagccggtcgac
gcgctgttgtcgacgtttccgctggtgcgtctcgacgaagccggcgcgaagcggttcctg
catggtcagcgcttgccgctgtcggcgctcgatccgatcgatgcggcagagggcgagcgt
gtgcgcgtgtacgatgcggcacggctgctcggcgtggcgcgcaaggccaacggcgtgctc
gcacccgaacgcctggtcgtgacggctgcgtga
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