Burkholderia ambifaria AMMD: Bamb_3550
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Entry
Bamb_3550 CDS
T00398
Name
(GenBank) proline racemase
KO
K12658
4-hydroxyproline epimerase [EC:
5.1.1.8
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam00470
D-Amino acid metabolism
bam01100
Metabolic pathways
Module
bam_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Bamb_3550
Enzymes [BR:
bam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.8 4-hydroxyproline epimerase
Bamb_3550
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pro_racemase
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABI89104
UniProt:
Q0B9R9
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All DBs
Position
2:373741..374676
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AA seq
311 aa
AA seq
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MMKRIQIIDSHTGGEPTRLVVSGFPSLGNGTMAERRDVLAREHNRYRTACILEPRGSDVM
VGALLCEPVSPEAAAGVIFFNNSGYLGMCGHGTIGVVRTLHHMGRIEPGVHRIETPVGTV
EATLHDDLSVSVRNVLAYRHAKAVAVDVPGYGPVKGDIAWGGNWFFLISDHGQRVAGDNV
AALTAYSSAVREGLERAGITGANGGEIDHIELFADDAEHDSRSFVLCPGHAYDRSPCGTG
TSAKLACLAADGKLEPGVVWRQASVIGSVFQASYAQADGGIVPTIRGSAHLSAEATLLIE
EDDPFGWGIVS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcgcattcagatcatcgattcgcacacgggcggcgaacccacgcggctcgtc
gtgtccggcttcccctcgctcggcaacggcacgatggccgagcgccgcgacgtgctcgcg
cgcgagcacaatcgctaccgcaccgcgtgcattctcgagccgcgcggtagcgatgtgatg
gtcggcgcgctgctgtgcgaacccgtgtcgccggaggctgcggccggcgtgatcttcttc
aacaacagcggctacctcgggatgtgcgggcacggcacgatcggcgtcgtgcgcacgctg
catcacatgggccgcatcgagccgggcgtgcaccggatcgaaacgccggtcggcaccgtc
gaggcgacgctgcacgacgacctgtcggtcagcgtgcgcaacgtgctcgcgtatcgccat
gcgaaggccgttgccgtcgacgtgccgggctacggccccgtgaagggcgacatcgcgtgg
ggcggcaactggttcttcctgatcagcgatcacggccagcgcgtggccggcgacaacgtc
gccgcgctgaccgcctattcgtccgccgtgcgcgaagggctcgagcgcgcgggcatcacc
ggcgcgaacggcggcgagatcgaccatatcgaactgttcgccgacgatgccgagcacgac
agccgcagcttcgtgctgtgcccgggccatgcgtacgaccgttcgccgtgcggcaccggc
acgagcgcgaagctcgcctgcctcgcggccgacggcaagctcgaaccgggcgtcgtgtgg
cggcaggcgagcgtgatcggcagcgtgttccaggcgagctatgcgcaggccgacggcggc
atcgtgccgacgattcgcggcagtgcgcatctcagcgcggaagcgacgttgctgatcgag
gaagacgatccgttcggctggggcatcgtgtcgtga
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