Burkholderia ambifaria AMMD: Bamb_5631
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Entry
Bamb_5631 CDS
T00398
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bam
Burkholderia ambifaria AMMD
Pathway
bam03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Bamb_5631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bam03400
]
Bamb_5631
Enzymes [BR:
bam01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Bamb_5631
DNA repair and recombination proteins [BR:
bam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Bamb_5631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABI91178
UniProt:
Q0B3U5
LinkDB
All DBs
Position
3:64607..65260
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AA seq
217 aa
AA seq
DB search
MTRHAPAKPAAPHDQAPATLDACRRCGLWEHATQPVPGAGPTDARIMLVGEQPGDQEDRT
GIPFVGAAGRMLDRALDEAGIERASVYVTNAVKHFKWEPRGKRRMHKTPAQREVAACHYW
LERELAALGPRVIVALGATALRAVLQDNNATLERTRQPVRSPDGCLVVATYHPSYVLRTR
GADSREQAYRTLVDALRTASRLARGSGGTHGARGDAE
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccacgcgcccgcgaagcccgccgcgccccacgaccaagcgccggccacgctc
gacgcgtgccgtcgctgcgggctatgggaacacgcgacgcagccggtgcccggcgcgggg
cccacggacgcgcgcatcatgctggtcggcgagcagccgggtgaccaggaagaccgcacg
ggcatcccgttcgtcggcgcggcgggccgcatgctcgaccgcgcgctcgacgaagcgggc
atcgagcgcgcgagcgtgtacgtgaccaatgcggtcaagcacttcaagtgggagccgcgc
ggcaagcggcgaatgcacaagacgcccgcgcagcgcgaggtcgccgcgtgccattactgg
ctcgagcgcgagctcgccgcgctgggcccgcgcgtgatcgtcgcgctcggcgctacggcg
ctgcgggccgtgctgcaggacaacaacgcgacgctggagcgcacgcgccagcccgtgcgc
tcgcccgacggctgtctcgtcgtcgcgacctatcacccgtcctacgtgctgcgcacgcgc
ggcgccgattcgcgcgagcaggcttaccggacgctcgtcgacgcgctgcgcaccgcgtcg
cgcctcgcgcgcggcagcggcggcacgcacggcgctcggggagacgccgaatga
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