Bacillus velezensis NAU-B3: BAPNAU_0764 Help Entry BAPNAU_0764       CDS       T02859                                  Gene name acoL Definition (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoamide dehydrogenase [EC:1.8.1.4] Organism bamb  Bacillus velezensis NAU-B3 Pathway bamb00010   Glycolysis / Gluconeogenesis bamb00020   Citrate cycle (TCA cycle) bamb00260   Glycine, serine and threonine metabolism bamb00280   Valine, leucine and isoleucine degradation bamb00310   Lysine degradation bamb00380   Tryptophan metabolism bamb00620   Pyruvate metabolism bamb00630   Glyoxylate and dicarboxylate metabolism bamb00640   Propanoate metabolism bamb01100   Metabolic pathways bamb01110   Biosynthesis of secondary metabolites bamb01120   Microbial metabolism in diverse environments bamb01200   Carbon metabolism bamb01240   Biosynthesis of cofactors Module bamb_M00009   Citrate cycle (TCA cycle, Krebs cycle) bamb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate bamb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA Brite KEGG Orthology (KO) [BR:bamb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     BAPNAU_0764 (acoL)    00020 Citrate cycle (TCA cycle)     BAPNAU_0764 (acoL)    00620 Pyruvate metabolism     BAPNAU_0764 (acoL)    00630 Glyoxylate and dicarboxylate metabolism     BAPNAU_0764 (acoL)    00640 Propanoate metabolism     BAPNAU_0764 (acoL)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     BAPNAU_0764 (acoL)    00280 Valine, leucine and isoleucine degradation     BAPNAU_0764 (acoL)    00310 Lysine degradation     BAPNAU_0764 (acoL)    00380 Tryptophan metabolism     BAPNAU_0764 (acoL)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bamb04147]     BAPNAU_0764 (acoL) Enzymes [BR:bamb01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      BAPNAU_0764 (acoL) Exosome [BR:bamb04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    BAPNAU_0764 (acoL) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA NAD_binding_8 FAD_binding_2 DAO HI0933_like FAD_oxidored AlaDh_PNT_C 3HCDH_N Trp_halogenase Lycopene_cycl FAD_binding_3 NAD_binding_7 TrkA_N 2-Hacid_dh_C UDPG_MGDP_dh_N Motif Other DBs NCBI-ProteinID:  CDH94545 LinkDB All DBs Position 830567..831946 Genome map AA seq 459 aa AA seqDB search MTLAIIGGGPAGYAAAVTAARRGEEVVLIDKGPLGGTCLNEGCIPTKSLLESANVLDKIR HANTFGIELPQNITLNWARMQGRKRQIVSRLVQGIQYLMKANQIKVISGTASFLTEQTLL VEGEGGAKDILEADRILIASGSEPAELPFAPFDGDWVIDSKDALSLQKIPSSLLIVGGGV IGCEFASLFSRFKTKVTVIESADRLLPAEDGEIAAVFEDSLRDSGADIQTKAALQRIDKE RKTAVWTKDGKEIEAQADHVLVAIGRKPRLQELNLEQSGIRYSPRGIEVNDHMQTNVPHI YACGDAAGGMQLAHAAIHEGITAAAHATGKDSKVDMRAVPRCIYTSPEMAAVGLTETQAR ETYGDVKIGECSFSANGKALIKHQHGGKMKIIAEPEFGEIVGVSMIGPDVTELIGQAVMM MNGEMTADMSEHFIAAHPTLSETLQEALLNVTGLAVHSV NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt ttgacactagccattatcggcggcgggcctgccggatatgcagctgccgtgactgccgcg cggaggggagaagaagtcgttctgatcgacaaagggccgctcggaggcacttgtctcaat gaggggtgcatcccgacaaagtcgcttttggaaagcgcgaatgtgctcgataaaatcagg catgcaaatacattcggcatcgaactgccgcaaaacattacactcaattgggcccgcatg caggggcgcaaacggcaaatcgtcagccggctcgtgcagggaattcaatacttaatgaaa gcaaatcagattaaagtcatcagcgggacagcttcatttctcacagagcagacattgctt gttgaaggagaaggaggcgcaaaagacattctggaagcggatcggatattgattgcatcc ggatctgaaccggcggagctgccgtttgccccatttgacggcgattgggtgatcgacagc aaagatgcgctttctttacagaaaatcccttcttctctgcttattgtcgggggaggtgtg atcggctgtgaatttgcctctttattcagccggtttaaaacgaaagtgactgtgattgaa tccgctgaccggctgctcccggcagaagacggggaaatcgccgccgttttcgaagactct ttaagagacagcggggctgatattcagacaaaagccgcccttcaacggattgataaagaa aggaaaaccgccgtgtggacaaaagacggcaaagaaattgaggcgcaggctgatcacgtt ttggttgcaatcgggagaaaaccgcgtttgcaagagctgaatctggagcagtccggcatc cggtattctccgcgcggtattgaagtcaatgaccatatgcagaccaatgtgcctcatata tacgcatgcggcgatgcggccggaggaatgcagctcgcgcatgccgccattcatgaagga atcacagccgccgcgcatgccacgggaaaggacagcaaagtcgatatgcgggcggtgccc cgctgtatttatacatcgccggaaatggccgctgtcgggctgacggaaacacaggcgaga gaaacatacggagatgtgaaaatcggagaatgttcattttctgctaacggaaaagcgtta attaaacatcagcatggcggcaaaatgaaaatcattgccgaaccggaattcggagaaatc gtcggcgtgtcaatgatcgggccggacgtgacggaattgatcggtcaggcggtcatgatg atgaacggtgaaatgacggcggatatgtcggagcactttatcgcggcgcatccgactctg tcagaaacgcttcaggaagccctgctgaatgtcaccggacttgcggtgcattccgtataa

Bacillus velezensis NAU-B3: BAPNAU_1351 Help Entry BAPNAU_1351       CDS       T02859                                  Gene name bfmbC Definition (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoamide dehydrogenase [EC:1.8.1.4] Organism bamb  Bacillus velezensis NAU-B3 Pathway bamb00010   Glycolysis / Gluconeogenesis bamb00020   Citrate cycle (TCA cycle) bamb00260   Glycine, serine and threonine metabolism bamb00280   Valine, leucine and isoleucine degradation bamb00310   Lysine degradation bamb00380   Tryptophan metabolism bamb00620   Pyruvate metabolism bamb00630   Glyoxylate and dicarboxylate metabolism bamb00640   Propanoate metabolism bamb01100   Metabolic pathways bamb01110   Biosynthesis of secondary metabolites bamb01120   Microbial metabolism in diverse environments bamb01200   Carbon metabolism bamb01240   Biosynthesis of cofactors Module bamb_M00009   Citrate cycle (TCA cycle, Krebs cycle) bamb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate bamb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA Brite KEGG Orthology (KO) [BR:bamb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     BAPNAU_1351 (bfmbC)    00020 Citrate cycle (TCA cycle)     BAPNAU_1351 (bfmbC)    00620 Pyruvate metabolism     BAPNAU_1351 (bfmbC)    00630 Glyoxylate and dicarboxylate metabolism     BAPNAU_1351 (bfmbC)    00640 Propanoate metabolism     BAPNAU_1351 (bfmbC)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     BAPNAU_1351 (bfmbC)    00280 Valine, leucine and isoleucine degradation     BAPNAU_1351 (bfmbC)    00310 Lysine degradation     BAPNAU_1351 (bfmbC)    00380 Tryptophan metabolism     BAPNAU_1351 (bfmbC)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bamb04147]     BAPNAU_1351 (bfmbC) Enzymes [BR:bamb01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      BAPNAU_1351 (bfmbC) Exosome [BR:bamb04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    BAPNAU_1351 (bfmbC) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 FAD_binding_2 GIDA AlaDh_PNT_C DAO NAD_binding_8 FAD_binding_3 3HCDH_N K_oxygenase HI0933_like Trp_halogenase Thi4 NAD_binding_7 2-Hacid_dh_C TrkA_N Motif Other DBs NCBI-ProteinID:  CDH95132 LinkDB All DBs Position 1402670..1404091 Genome map AA seq 473 aa AA seqDB search MATEYDVVILGGGTGGYVAAIRAAQLGLKTAVVEKEKLGGTCLHKGCIPSKALLRSAEVY RTAKEAAGFGIETEGVSLRFDSVQKRKQGIVDRLAGGVAHLMKKGKIDVFNGYGRMLGPS IFSPLPGTVSVEYANGEENDMLIPKQLIIATGSRPKMLPGLEADGTYILTSDEALELERL PQSMMIVGGGVIGIEWASMLNDFGVNITVIEYADRILPTEDRDISSEMEKLLTKKGIKIV KGAKVLPDTLEKADGVSIAAEKNGKKETYHAEQMLISIGRQPNIEGIGLENTDIEAENGS IIVNEAGQTKESHIYAIGDVVGGLQLAHVASREGIIAVEHMAGLNPAPLDAALVPKCIYS NPEAASVGLTEEEALRKGHELKIGKFPFMAIGKALVYGESDGFVKIVVDRNTDDILGVHM IGPHVTDMISEAGLAKVLDATPWEIGQSIHPHPSLSEAIGEAALAADGNAIHF NT seq 1422 nt NT seq  +upstreamnt  +downstreamnt atggcgactgagtatgatgtggtcattctgggcggcggcacaggcggttatgtagccgcc atcagagcggcccagctcggcttaaaaacggccgttgtagaaaaagaaaagctcggcgga acatgcctgcataaaggatgtatcccgagtaaagcgctgttaagaagcgcggaagtgtac cgaaccgcaaaggaagcggcaggattcggcattgaaacggaaggtgtctccctccgcttt gacagcgtgcaaaaacgaaagcagggaatcgttgaccggctggccggcggagtcgcccac ttgatgaaaaaggggaagattgatgtattcaacgggtacggacgtatgctcggcccttcc atcttctcacctcttcccggtacggtttccgtcgaatacgcaaatggtgaagaaaacgac atgctgataccgaaacaattgattatcgcaaccggttcaaggccgaaaatgctaccgggt ttagaagcagacggtacatatattctgacatcagatgaagcgttagagcttgaacgtctg ccccaatccatgatgatcgtcggcggcggtgtcatcggaattgaatgggcatccatgctg aacgatttcggcgtcaatatcactgtgattgaatatgcggaccgcattttgccgacggaa gaccgtgatatttcaagcgagatggaaaaactgttaacgaaaaaaggaattaagatcgtg aagggtgcgaaagtgcttccggatacattggaaaaagcggacggcgtttcaattgccgct gaaaagaatggaaaaaaagaaacgtatcacgcggaacaaatgcttatttccatcggccgc cagccgaacattgaagggatcggccttgaaaacacggacattgaagcggaaaacggttct atcatcgtgaacgaagccgggcagacgaaggaatcgcacatttatgcgatcggtgatgtt gtcggcgggctgcagcttgcgcatgtggcctcccgtgagggcatcattgccgttgagcat atggcgggtcttaatccggctccgcttgatgccgctcttgtgccgaaatgtatttattca aatccggaagcggcgagcgtcggtctgacagaagaggaagctcttcgaaaagggcatgaa ctgaaaatcgggaagtttccgttcatggcgatcggaaaggctcttgtatacggagaaagc gacggctttgtcaaaatcgtcgtcgatcggaatacagatgatattctcggtgttcatatg atcggcccgcacgtcaccgatatgatctctgaagcggggcttgccaaggtgctcgacgcg acgccttgggaaattggccagtccatacatccgcatccgtcgctgtcagaagcgattgga gaagctgcgttagccgcagacggaaacgcgattcatttttaa

Bacillus velezensis NAU-B3: BAPNAU_2308 Help Entry BAPNAU_2308       CDS       T02859                                  Gene name pdhD Definition (GenBank) dihydrolipoamide dehydrogenase   KO K00382   dihydrolipoamide dehydrogenase [EC:1.8.1.4] Organism bamb  Bacillus velezensis NAU-B3 Pathway bamb00010   Glycolysis / Gluconeogenesis bamb00020   Citrate cycle (TCA cycle) bamb00260   Glycine, serine and threonine metabolism bamb00280   Valine, leucine and isoleucine degradation bamb00310   Lysine degradation bamb00380   Tryptophan metabolism bamb00620   Pyruvate metabolism bamb00630   Glyoxylate and dicarboxylate metabolism bamb00640   Propanoate metabolism bamb01100   Metabolic pathways bamb01110   Biosynthesis of secondary metabolites bamb01120   Microbial metabolism in diverse environments bamb01200   Carbon metabolism bamb01240   Biosynthesis of cofactors Module bamb_M00009   Citrate cycle (TCA cycle, Krebs cycle) bamb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate bamb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA Brite KEGG Orthology (KO) [BR:bamb00001]  09100 Metabolism   09101 Carbohydrate metabolism    00010 Glycolysis / Gluconeogenesis     BAPNAU_2308 (pdhD)    00020 Citrate cycle (TCA cycle)     BAPNAU_2308 (pdhD)    00620 Pyruvate metabolism     BAPNAU_2308 (pdhD)    00630 Glyoxylate and dicarboxylate metabolism     BAPNAU_2308 (pdhD)    00640 Propanoate metabolism     BAPNAU_2308 (pdhD)   09105 Amino acid metabolism    00260 Glycine, serine and threonine metabolism     BAPNAU_2308 (pdhD)    00280 Valine, leucine and isoleucine degradation     BAPNAU_2308 (pdhD)    00310 Lysine degradation     BAPNAU_2308 (pdhD)    00380 Tryptophan metabolism     BAPNAU_2308 (pdhD)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:bamb04147]     BAPNAU_2308 (pdhD) Enzymes [BR:bamb01000]  1. Oxidoreductases   1.8  Acting on a sulfur group of donors    1.8.1  With NAD+ or NADP+ as acceptor     1.8.1.4  dihydrolipoyl dehydrogenase      BAPNAU_2308 (pdhD) Exosome [BR:bamb04147]  Exosomal proteins   Exosomal proteins of breast cancer cells    BAPNAU_2308 (pdhD) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 GIDA FAD_oxidored FAD_binding_2 HI0933_like NAD_binding_9 NAD_binding_8 DAO Amino_oxidase UDPG_MGDP_dh_N FAD_binding_3 DUF4150 Thi4 3HCDH_N AlaDh_PNT_C Trp_halogenase Motif Other DBs NCBI-ProteinID:  CDH96088 LinkDB All DBs Position complement(2481548..2482960) Genome map AA seq 470 aa AA seqDB search MVVGDFPIETDTLVIGAGPGGYVAAIRAAQLGQKVTVVEKATLGGVCLNVGCIPSKALIN AGHRYENAKHSDDMGITAENVTVDFTKVQEWKASVVNKLTGGVAGLLKGNKVDVIKGEAY FVDSNSVRVMDENSAQTYTFKNAIIATGSRPIELPNFKYSERVLNSTGALALKEIPKKLV VIGGGYIGTELGTAYANFGTELVILEGGDEILPGFEKQMSSLVTRRLKKKGNVEIHTSAM AKGVEERPDGVTVTFEVKGEEKTVDADYVLITVGRRPNTDELGLEQVGIEMTDRGVIKTD KQCRTNVPNIYAIGDIIDGPPLAHKASYEGKIAAEAISGEPAEIDYLGIPAVVFSEPELA SVGYTEAQAKEEGIEVVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASA SDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVAIGSPIHIVK NT seq 1413 nt NT seq  +upstreamnt  +downstreamnt atggtagtaggagatttccctattgaaacagatactcttgtgattggtgcgggacctggc ggctatgtagctgccatccgcgctgctcagcttggacaaaaagtaacagtcgttgaaaaa gcaactcttggaggcgtttgtctgaacgtcggctgtattccttcaaaagcgctcatcaat gcaggccatcgttacgagaatgcaaaacattcagatgacatgggaatcactgctgagaac gtaacggttgactttacaaaagtccaagaatggaaagcttctgttgtaaataagcttacc ggcggtgttgcaggtcttttaaaaggaaataaagtggacgttataaaaggggaagcttat ttcgtagacagcaactctgtccgcgtaatggatgagaactctgcgcaaacatacacattt aaaaacgcaatcattgctaccggttctcgccctatcgaattgccaaacttcaaatatagc gaacgcgttctgaactctacaggcgcacttgcgcttaaagaaattccgaaaaagctcgtt gttatcggcggcggatatatcggtactgagcttggaacagcgtatgcgaacttcggaact gaattggttattttagaaggcggagatgaaattcttcctggcttcgaaaaacaaatgagt tctctcgttacccgcagactgaagaaaaaaggcaacgttgaaatccatacaagcgctatg gctaaaggcgttgaagaaagacctgacggcgtaacagttacattcgaagtaaaaggcgaa gaaaaaacggttgatgctgattacgtattaatcactgtcggacgccgtccgaacactgac gagctcggccttgagcaagtcggtatcgaaatgactgaccgcggtgtcattaaaacagac aagcagtgccgcacaaacgtaccgaacatttacgcaatcggtgacatcattgacggacct ccattggctcacaaagcgtcttacgaaggtaaaatcgctgcggaagctatttcaggagag ccggctgaaatcgattacctcggtattccggcggttgtattctctgagcctgaactggct tctgtcggttacactgaagcacaggcgaaagaagaaggcattgaagtcgttgcagctaag ttcccgtttgcagcaaacggacgtgcgctgtctcttaacgaaactgacggcttcatgaag ctgatcacccgtaaagaagacggtcttgtaatcggtgcgcaaattgccggcgcaagcgct tctgacatgatttctgaattgagcctggcgatcgaaggcggaatgactgctgaagatatc gcaatgacaattcacgctcacccgacattgggcgaaatcactatggaagctgccgaagta gcaatcggaagcccgatccatatcgtaaaataa

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