Bacillus amyloliquefaciens CC178: U471_10730
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Entry
U471_10730 CDS
T02893
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bamc
Bacillus amyloliquefaciens CC178
Brite
KEGG Orthology (KO) [BR:
bamc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamc03400
]
U471_10730
Enzymes [BR:
bamc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U471_10730
DNA repair and recombination proteins [BR:
bamc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
U471_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGZ55779
LinkDB
All DBs
Position
1051129..1054629
Genome browser
AA seq
1166 aa
AA seq
DB search
MGVEFLVGRSGSGKTRLIIDSIQDELRREPFGKPIIFLVPDQMTFLMEYELAKTPDIGGM
IRAQVFSFSRLAWRVLQHTGGMNRPFVTTTGVQMLLRKLIEEHKHEFKVYQKASDKTGFT
EQVERMLTEFKRYCIEPEDVRRMAESGTASEYRGERMLSEKLHDLGILYQQMERSLAGHY
LHSEDYLTLLAQQIPLADVVKGAHVYVDGFYQFTPQELRVLEQLIMHAEHVTFSLTADSP
SAEQAPDELDLFRMTGSTYYKLYQTAKELNADISCKELHGTKRHQHAPELACIESQYDVR
PAAAYTGGQEAFTVMQAQNRRAELEGIAREIQSLVRDGGYRYKDMAILIRQPEDYKDLLK
EVFADYGLPYFIDGKASMQHHPLIEFIRSSLDVVKGNWRYEAVFRCAKTELLFPLDQPEQ
KIREQVDQLENYCIAYGIKGERWTSGERFVYRRFVSLDEDFAQTDQEIEMEHMLNETKEW
MAAPLVKLQNRMKKAKTVQSMAEALYLFLEDTDVPLKLDRKRQRAEEAGNMIEAQQHGQA
WDAVIQLLEEFAGMMGEDEISLALFQQMLETGTESLHFSLIPPALDQVFVGNMDLSRMYG
TSCTFVIGANDGVLPARPDENGVLSDDDREWLKAVGVELSSAGRERLLDEHFLIYMALSS
PSDRLYVSYPIADAEGKTLLPSIVVNRLGELFPDHQEKLSAADPEQVSEEEQLQYLVNKQ
VAQTYTASQLRLWTREYEISDVWWSAYNVLMKEPDHRRAKKLFSSLFFRNEAKRLERPVS
RQLYGEHIKGSVSRMEAFNACQFSHFASHGLQLKERQFFKLDAPDIGQLFHSSLKLISDR
LREQKLEWRDLTKDQCRNFSYEAVERLAPKLQKEILLSSNRHFYVKEKLQKIVTRVSGIL
SEHAKASGFVPVGLELGFGGSGPLPPLTFTLKNGCTMELVGRIDRVDKAESSKGLLLRIV
DYKSSDRGLDLAEVYYGLALQMLTYLDLSITHSEDWLGMKATPAGVLYFHIHDPMIQASL
PMGLDEIEQEIFKKFKMKGLLLGDREAISLMDTTLEEGRSNIVNAGLKKDGSLRSDSAAV
SEQDFHLLTDHVRRTFEQAGEAITDGLVSITPYKLKDKTPCTYCAFQSVCQFDESLKENE
YRSLKAEKDGTILDWLKKEADDDANS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgttgagtttttagtaggcagatcggggagtgggaaaacgaggctgattatcgac
agcattcaagatgaactgcgccgggagccgttcgggaaaccgatcatttttctagtcccg
gatcaaatgacgtttttaatggaatatgagcttgctaaaacgccggatatcggcggcatg
atacgcgctcaagtgttcagtttttcgcgtttggcgtggcgcgtgcttcagcataccggg
ggcatgaaccgcccgtttgtgacgacgacgggtgtgcagatgcttttaaggaaattgatt
gaagaacataagcacgagtttaaagtgtatcaaaaagcgagtgacaaaaccgggttcact
gagcaggtggaacggatgctgacagagtttaagcggtactgtattgagcctgaagacgtc
cgacgcatggcggaaagcggaacggcgtcagaatatcgcggagagcggatgctgtctgaa
aaacttcatgatttaggcattttatatcagcagatggaaagaagcctcgccggacactat
ttgcattcagaggattatttgacgctgctcgctcagcagattcctttggcggacgttgta
aaaggcgcccatgtttacgtcgacggattctatcaatttacgccgcaggaattaagggtg
ctggagcagctgatcatgcatgctgaacatgtcacattctcgctgacggcggacagccct
tcggcggaacaggcaccggatgagctcgatctgttcagaatgacgggaagcacatactat
aagctttatcagacggcaaaggaattgaatgccgatatttcctgcaaggaactgcatggc
acgaagcggcatcagcatgcgccggagcttgcctgtatagagtcgcagtacgatgtgcgt
cccgctgcggcgtataccggcggacaggaagcttttaccgtcatgcaggcgcaaaacaga
agagctgagcttgaaggtattgcccgggaaattcaatcacttgtccgggacggaggatac
cggtacaaagatatggcgattctcatccgtcagccggaagattataaagatttgctgaag
gaagtgtttgccgattacgggcttccttattttattgacggaaaagcttctatgcagcat
cacccgcttattgaattcatccgttcaagcctggatgtcgtgaaggggaactggagatat
gaagcggtgttccgctgtgcgaaaaccgaactgttattcccgcttgatcagccggagcag
aaaataagggagcaggttgatcagcttgaaaattactgtatcgcctacggcattaaaggg
gagcgctggacgagcggcgagcggtttgtatacaggcgcttcgtatcgctcgatgaggat
ttcgcgcagacggatcaggaaatagagatggaacacatgctgaatgagacgaaagagtgg
atggccgcgcccctcgtcaagctccaaaaccggatgaaaaaagcgaaaacggttcaaagc
atggcggaggctctttatctctttttggaagataccgatgttcccctgaagctggaccgg
aaaaggcagcgggccgaagaggccggaaacatgatcgaagcgcagcagcacggtcaggcg
tgggatgccgttatccagcttctcgaggagtttgccggcatgatgggtgaagatgaaata
tctttggcgctgttccagcaaatgcttgaaacgggaacggaatcgcttcatttttcttta
attccgcccgcgcttgaccaagtatttgtagggaatatggatctctcaagaatgtacggc
acgtcctgcacattcgtcatcggtgccaatgacggcgttcttccggcgcgcccggatgaa
aacggcgtgctgtctgatgatgacagggagtggctgaaagcagtcggagtggagctgtct
tccgcggggcgtgagcggctgcttgatgagcattttctcatctatatggcgctgtcaagt
ccgtctgaccgtctttatgtgtcatacccgattgccgatgcggaaggaaaaacgctcctg
ccgtcaatcgttgtaaacaggcttggcgagctgtttcccgatcatcaggaaaagctgtca
gcggctgatcccgagcaggtaagcgaagaagagcagcttcagtatctcgtcaataaacag
gtggctcagacatatacggcaagtcagctcaggctgtggacaagagagtacgagatcagt
gacgtatggtggagcgcatacaatgtgctgatgaaagagcctgatcaccggcgtgcgaaa
aagctgttttcaagcctgtttttccgcaatgaggcgaagcgtcttgaacggcctgtttcg
cgccagctttacggcgagcatattaaaggaagcgtctcccggatggaggcgtttaatgcc
tgccagttctctcattttgcatctcacgggcttcaattaaaagagcggcagtttttcaag
ctggacgcgccggatatcggccagctgtttcactccagcctgaagctgatttcagaccgg
cttcgtgagcagaagctggaatggcgcgatctgacgaaagatcagtgccggaatttctcc
tatgaagcggtggaacggcttgcgccaaagctgcaaaaagagattctgctcagctcaaac
agacacttttatgtgaaggaaaaactgcagaagatcgtcacgcgtgtttctggcatatta
agcgagcatgcgaaggcgagcggtttcgtcccggtcggtcttgaactcggtttcggcgga
agcgggccgctgcctccgctcactttcacgctgaaaaacggctgtacgatggaactcgtc
ggacggatcgaccgcgtggataaagcggaaagctcaaaaggcctgctgctgagaatcgtt
gattataaatcaagcgacagggggcttgatctggctgaggtgtattacgggctcgctctg
caaatgctcacatatcttgacttatcgattacacattccgaagattggctcggtatgaaa
gcgaccccggcaggcgttttgtatttccatattcatgatccgatgattcaggccagtctg
ccgatggggcttgatgaaatcgagcaggaaatttttaagaaatttaaaatgaaaggcctt
ctcctcggtgaccgggaggcgatcagcctgatggacacgactttggaggaagggcgttca
aatatcgtcaatgccggtttgaaaaaggacgggtctttaagatccgactcagccgcggtc
agtgaacaggactttcatctgctgacagaccatgtgcggcggacttttgaacaggcgggc
gaagcgataacggacgggcttgtgtccattaccccgtataagctgaaagataagacgcct
tgtacgtactgtgcgtttcaatcggtgtgccagtttgatgagtcgcttaaggaaaatgaa
taccgcagcctgaaagcggaaaaagacggcaccatactggattggctgaagaaggaggcg
gatgatgatgcaaattcctaa
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integrated database retrieval system
