Bacillus amyloliquefaciens LFB112: U722_16455
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Entry
U722_16455 CDS
T02965
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bamf
Bacillus amyloliquefaciens LFB112
Pathway
bamf03420
Nucleotide excision repair
bamf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bamf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U722_16455
03430 Mismatch repair
U722_16455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bamf03400
]
U722_16455
Enzymes [BR:
bamf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U722_16455
DNA repair and recombination proteins [BR:
bamf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U722_16455
MMR (mismatch excision repair)
Other MMR factors
U722_16455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
Viral_helicase1
AAA_30
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
DEAD
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHC43630
LinkDB
All DBs
Position
complement(3232247..3234562)
Genome browser
AA seq
771 aa
AA seq
DB search
MAKRDKEWKEEQERINFVMKELEQKQTHLEASSGGLKQDIVGLRKTFWDDVTVNMDDAHE
AAETFLSIKQQAEMLSERERTHRLQYRQLQKIQKLKTSPYFGRVDFTEKGESSSERIYIG
LTSLMDENNEQFLIYDWRAPISSLYYQYSPGKARYEVPEETIEGDITLKRQFIIKNGTLK
AMFNTDMTIGDEMLQEVLSGHSGQHMKNIVSTIQKEQNEIIRDEKSKYLIVQGAAGSGKT
SAALQRAAYLLYRGRGVLDARQIVLFSPNILFNSYVSAVLPELGEENMEQATFQEYIIRR
LGRKFDCESPYEQLEYCLTEQNKDALSVRLAAIAYKASSAFQAMIDRYAGSLSVSGLKCK
QISFRGDILISKERIEAYFYSLDQQLPIPNRAELTAEWLLAEISALEKKERKKEWVLQES
ELLDKEDYAEVYQTLKKQAADDEPAFDDHQREQRLLGAIIVGKAFKPIKQAVRRLGFLDI
KRMYLRLFSDWGADEKPDHWESIGALTGNAFAERSLPYEDAAPYLYLQDLLEGKRKNTQM
KHVFIDEAQDYSPFQLTYIQTIFPAAKMTVLGDVSQSIYAHTITGPSSLAGCFRNGAEKY
VSLKRTYRSTRQIVEFTKALLADGDDIEPFNRNGEKPRVLRTDTENARREQLADTIRELR
QKGWETVAVICKTAAEAKKVFQAVSAESGVRLINKENQPFQKGVCVIPVYLAKGIEFDAV
IAADASAAQYNSEHDRKLLYTACTRAMHHLTVLSPGEPSPFIKEVPAGLFV
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgtgataaagagtggaaagaagagcaggaaagaatcaattttgtcatgaag
gaactggaacagaaacaaactcatcttgaagcctcatcgggcggattgaagcaggatatt
gtcggcctgagaaaaacgttttgggatgatgtcaccgtgaatatggatgatgcccacgaa
gcggctgagacatttttaagcattaaacagcaggcggaaatgctttcagaacgtgaacgg
acgcatcggcttcaataccggcagcttcaaaaaatccaaaagctgaaaacctctccttac
ttcggccgtgtcgattttacggaaaaaggggagtcctcttccgagcggatttatatcggg
ctgacttctttaatggatgaaaacaacgagcaatttctcatttatgattggcgcgcgccc
atctcatctctttactatcaatattccccgggaaaagcccgctatgaagttccggaagaa
acgatagagggagacatcacactgaagcggcagtttatcattaaaaacgggacgcttaaa
gcgatgtttaacacggatatgacgattggtgacgaaatgctgcaagaggtgctgagcggc
cattccggacagcatatgaaaaacatcgtgtcaaccatccaaaaagaacagaacgaaatc
atccgggatgaaaaaagcaaatatctcatcgttcagggagccgccggaagcgggaaaaca
tccgcggcgcttcagcgggccgcttacttgctgtaccgcgggcgcggggtgcttgatgcc
cgtcagattgtattgttttccccgaacattttgttcaacagttatgtgtccgccgtattg
ccggaattgggagaagagaatatggagcaggccacctttcaggaatatatcatccgccgg
ctcggacgaaagtttgattgtgaaagcccgtacgagcagcttgaatattgcctgactgaa
caaaataaggacgcactttccgtaaggctcgcagccattgcttacaaagcgtcatcagct
tttcaggccatgattgaccgctatgccgggtcgctttcggtctcgggcctgaaatgtaaa
cagatcagcttccggggagacatcctgatttcaaaagagcggattgaagcctatttttat
tcgcttgatcagcagctgccgattccgaacagagcggagctgacggcggaatggcttctc
gcggaaatcagcgctctcgaaaaaaaggagcgtaagaaggaatgggtcttgcaggagagc
gagctgcttgataaggaagactatgctgaggtttatcaaacactcaagaagcaggcggca
gatgatgaacctgcatttgacgaccatcagcgcgaacagcgcctgcttggcgccattatt
gtcggcaaagcctttaaaccgattaagcaggccgtcagacggctcggctttctcgatata
aaacggatgtatctccggctgttttcagactggggagctgatgaaaagcccgatcattgg
gagagcatcggcgctttgaccggaaacgcatttgcagaacggtcgcttccgtatgaagat
gccgctccgtatctgtatttgcaggatctgttagaaggaaaaagaaaaaacacacaaatg
aagcacgtcttcattgatgaagcgcaggattattccccatttcagctcacgtatattcaa
accatcttcccggcggcaaagatgacggtgctcggtgatgtcagccagtcgatttatgcc
cataccattacgggcccttcttccctcgccggctgctttcgcaatggtgcagaaaagtat
gtcagcctgaagcggacttacagatcgacgcggcagattgttgaatttacgaaagcgctg
ctggctgacggcgatgacattgagccttttaaccggaacggggaaaaaccgcgtgttttg
cggacggatacagaaaatgcgcggcgggaacaattggcggatacaatccgggagctcaga
caaaaaggctgggagacggtcgccgtcatctgcaaaacggccgcggaagccaaaaaagtg
tttcaggcggtcagcgccgagagcggtgtccgtttaatcaataaagaaaaccagcctttt
caaaaaggggtatgcgtcattcccgtttatttggcaaaaggcattgagtttgacgccgtc
atcgccgctgacgcctctgctgcccagtacaatagcgaacatgaccgtaagctgttatat
acggcctgtacgcgggcgatgcatcatttgaccgtattgtctccgggagaaccctctcct
tttataaaagaagtgcccgccggcttattcgtataa
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