Bacillus velezensis UCMB5036: BAM5036_0180
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Entry
BAM5036_0180 CDS
T02480
Symbol
sigW
Name
(GenBank) RNA polymerase ECF(Extracytoplasmic function)-type sigma factor W
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
baml
Bacillus velezensis UCMB5036
Brite
KEGG Orthology (KO) [BR:
baml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
baml03021
]
BAM5036_0180 (sigW)
Transcription machinery [BR:
baml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BAM5036_0180 (sigW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_28
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
CCP20246
LinkDB
All DBs
Position
198744..199307
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AA seq
187 aa
AA seq
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MENLIKKRIKQVKKGDQNAFAEIVDLYKDKIYQLCYRMLGNVHEAEDIAQEAFIRAYVNI
DSFDINRKFSTWLYRIATNLTIDRIRKKKPDYYLDAEVAGAEGLTMYSQIAADGVLPEDA
VLSLELSDTIQKKILKLPDKYRTVIVLKYIDELSLIEIGEILNIPVGTVKTRIHRGREAL
RKQLRDL
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctgattaaaaaaagaatcaagcaagtcaaaaaaggcgatcaaaatgcgttt
gcagaaatcgttgacctttataaagataagatttaccagctttgctaccgcatgctcggc
aatgttcacgaagcggaagatattgcgcaggaagcttttatcagagcgtatgtcaatatc
gacagtttcgatatcaacagaaagttttcaacgtggctttacagaattgcgaccaacctg
accattgaccgcatccgcaagaaaaagcctgattactatctggacgcagaagtagcggga
gcagaagggctgacgatgtattcgcagatcgccgcggacggggttctccctgaagacgcc
gtattgtcattggagctgtcggacacaattcagaaaaagattttaaagctgcctgacaag
tacagaacggttattgtattaaagtatattgacgaactctctttaattgaaatcggggag
attctgaatatccctgtcggcaccgtcaagacaaggatacacagaggcagagaggctctt
agaaaacaattgagggatctttaa
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